Schizophyllum commune: SCHCO_02614908
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Entry
SCHCO_02614908 CDS
T01331
Symbol
SCHCODRAFT_02614908
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
scm
Schizophyllum commune
Pathway
scm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SCHCO_02614908 (SCHCODRAFT_02614908)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scm03041
]
SCHCO_02614908 (SCHCODRAFT_02614908)
03009 Ribosome biogenesis [BR:
scm03009
]
SCHCO_02614908 (SCHCODRAFT_02614908)
Enzymes [BR:
scm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SCHCO_02614908 (SCHCODRAFT_02614908)
Spliceosome [BR:
scm03041
]
Complex A
U2 snRNP components
U2 related factors
SCHCO_02614908 (SCHCODRAFT_02614908)
Complex B
SCHCO_02614908 (SCHCODRAFT_02614908)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
SCHCO_02614908 (SCHCODRAFT_02614908)
Ribosome biogenesis [BR:
scm03009
]
Eukaryotic type
90S particles
Helicases
SCHCO_02614908 (SCHCODRAFT_02614908)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_N
DEAD
HA2_C
AAA_22
AAA_19
ResIII
SRP54
nSTAND3
Herpes_ori_bp
SLFN-g3_helicase
NB-ARC
cobW
T2SSE
AAA_30
AAA_11
AAA_29
Motif
Other DBs
NCBI-GeneID:
9586361
NCBI-ProteinID:
XP_003033799
UniProt:
D8PZP0
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MCEDINQPGLTLAAPPTSLKAPMFRHFLPQRRKVSADDIPFDDALHGLVPSQVTGHQVKR
AQAHSISPFTKRRYTPRYKELLSSRSSLPANAQADEFLRSFNQRKVTLVTGAVGAGKTTQ
IPQLIIYADMPHKKGKAVACVQPRKIMAAIQAHRVAQELEVPVGEHVGYATVSENRTTRQ
TMLVYLTDEALVREMLSDRYLSKYSVIILDDVHERSLYSDILICLLRDVIRKQSDLKLVL
MSALDDVSLFEDYFGVRGHVRLTGVEYTVSTHYAREPSTALIDDALGLVTDIHLTQEAGD
ILLFLTEDEEIQHICKLIHETVEPGLPPLTAIPVHEHMRPADIQAKVYATLHGPPQRRVF
VCNDLAKSALFIPSIAFVIDPGFSKRQIYDPALRASTSRLIPTDKESGSLRKHAAGHLRP
GKCFRLLSREDYHENSEDEILPEILTADLTSAVLHLIGLGVKNVLTFSYLDPPPPGVLEG
AIDLLTHLKALDSAGRLTRLGETMAKLPVAPQLAKALMAAPKCCCYREMLKISAMLHVQY
RQEIFRRPPDLEEEAEMAHKLLSTSPTSDHMTLLNIYNTYSRIKDRHGRSWTDKMFLSQA
ALEEAVLMRDVLEKTMLRIDPSLASPTEAPTAAHLQRGIARSLVYGFFTQVAHREGDTYM
TFQNDVPATLHVDSGLEATPDWVVYDQLVLSPDPTLRTVTAIDPGWLFELAPEYFNLRYL
PETHSKYALGATLQPGLLSRVQHEADVKAVTERFEYFTVHDHHT
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgaagatatcaaccagcctggccttacgttggctgcgcctcccacctctctcaag
gcgcccatgtttcgacactttctaccccagcgacgcaaggtctctgccgacgatataccc
ttcgacgatgcgctgcatgggctcgtgccctcgcaggttactggacaccaggtcaagcga
gcgcaggcccattccatcagtccgttcaccaagcggagatacacgccacgctacaaggag
ctcctctcgagtcgcagctcgctcccggccaacgcacaggcggatgagttcctccgatcc
ttcaaccagcgcaaggtgaccctcgtaacaggcgctgttggcgctggcaagacgacacag
atcccacaactgatcatctacgcggacatgccacacaagaagggcaaggccgtcgcttgc
gtacaaccccggaaaatcatggctgctatccaagcccatcgagtggctcaggaattggaa
gtccccgtcggcgaacacgtgggatatgcgaccgtctccgagaacaggacgacgcgccag
acgatgctggtctacctcaccgacgaggcgctcgtgcgggagatgctctctgatcgctac
ctctcgaaatactcggtcatcatcctggacgacgtgcatgagcgctcgctatactcggat
atcctcatctgtctgctccgagatgtgattcggaagcagtcagatctgaagctcgtgctg
atgtctgcgctggacgatgtgtccctcttcgaagactactttggcgtcagagggcacgta
cgactgacgggcgtcgaatacactgtcagcacgcactacgcacgggaaccaagtaccgcc
cttatcgacgacgctctcgggctcgtcacggatatccatctgacgcaggaggctggagac
atacttctatttcttaccgaggacgaagaaatacagcacatctgcaaactcatccacgag
acagtcgagcccggtcttcctccccttactgccattcccgtgcacgagcacatgcgacct
gcagatatccaggccaaagtatacgctacgcttcacgggcctccccaacgtcgagtcttc
gtctgcaacgacctggccaaatctgcgttgtttatcccgagtatcgcctttgtcatcgac
ccaggattctccaagcgacagatatacgaccctgcgctgcgagcgagcacctctcgcttg
atacctacggacaaggagtcgggatctctgcgcaagcacgccgctggccacctccgccct
ggcaagtgtttccgactgctcagtcgggaggactaccacgaaaactcggaagacgagatt
ttgccggagattttgaccgccgacctgacctccgccgtattgcacctcattggcctcggg
gtcaagaacgttctcaccttcagctacctagacccaccacctccgggcgtgctggagggt
gcgatagacctcctgacgcatctgaaggcccttgacagcgctgggagactgacacgcctg
ggagagactatggctaagctaccggtcgcgccacagctggcgaaggccttgatggcagcg
ccaaaatgctgctgctaccgcgaaatgctgaaaatctctgccatgctgcacgtccaatac
cgccaggaaatattccgccgcccacctgacctcgaggaggaggccgaaatggcgcacaag
ctcctgtccacctcgcccaccagcgaccacatgacattactcaacatctacaacacgtac
tcccgaatcaaagaccggcacggccgcagctggacggacaagatgttcctctcgcaggcg
gcattggaagaagcggtgctgatgcgcgacgtgctggagaagacgatgcttcgcatcgat
ccctcgctggcttcgcccacggaggcgccgacggcggcgcacttgcagcgcggcattgcc
cggagtctcgtgtacgggttcttcacgcaggtcgcgcacagggagggcgacacgtatatg
acgttccagaatgatgtgccggcgacgctgcatgtcgacagcgggctggaggcgacgccg
gactgggtggtgtacgaccagctggtcctttctccggatcccacgttgcgtacggttact
gctattgacccaggatggctattcgaactcgctcccgaatacttcaacctccgctacctg
ccagagacacactccaagtacgcgctgggcgcgaccctgcaacctggactcctgtcaagg
gtgcaacatgaggcagatgtcaaggcggtgaccgagcggttcgagtactttactgtacat
gatcatcatacctga
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