Schizophyllum commune: SCHCO_02616112
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Entry
SCHCO_02616112 CDS
T01331
Symbol
SCHCODRAFT_02616112
Name
(RefSeq) CAF1-domain-containing protein
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
scm
Schizophyllum commune
Pathway
scm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCHCO_02616112 (SCHCODRAFT_02616112)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scm03019
]
SCHCO_02616112 (SCHCODRAFT_02616112)
Messenger RNA biogenesis [BR:
scm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SCHCO_02616112 (SCHCODRAFT_02616112)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
SCHCO_02616112 (SCHCODRAFT_02616112)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
9585762
NCBI-ProteinID:
XP_003033973
UniProt:
D8PXF3
LinkDB
All DBs
Position
Unknown
AA seq
346 aa
AA seq
DB search
MGHIRDVWAQNLDAEMKNIRSLIEDYPYVAMDTEFPGVVARPIGQWKSTSEYHYQTMRCN
VDLLKIIQVGITLADAEGNMPPEPSTWQFNFRFSINEDMYSPDSIDLLRKSGIDFQRHEE
QGINPNDFAELMITSGLVLSPDTTWISFHSGYDFGYFVKLLTAISLPTTEDTFFELFRIW
FPSVYDIKVMMRACNGLKGGLQELADDLSVARIGPSHQAGSDSLLTASAFFKMRDMYFKE
SLQDPEKAEKLRSEYSGKLYGLGQTFSIANGIADPGRGGATIAEREDRTVTRELSQTPAP
GPGQGVSLAGQAAVMGMGGGMGMPTPGYGPLANGPYMRTQMVGGAR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgggccacatacgggatgtatgggcacaaaacctcgacgcggagatgaagaacatccgc
agtctcatagaagactatccctatgtcgccatggacaccgagttccccggtgtcgtggcg
cgcccgatagggcagtggaagtcgacgtcggagtatcactaccagacgatgcgctgtaac
gtcgacctgctcaagatcatccaagtcggcatcacgctcgcggacgcggaggggaacatg
ccaccggagccaagtacatggcagttcaactttcgcttcagcatcaacgaggacatgtac
tccccggactcgattgatttactgcgaaaatcaggcattgactttcagcgccatgaggag
cagggcatcaacccaaacgactttgccgagcttatgatcacctctggactggtcctgtcg
ccagacacgacatggatatcattccacagtggttacgacttcggctacttcgtcaaactc
ctcaccgcaatatccctccccaccactgaagacaccttcttcgagctcttccgaatatgg
ttcccatccgtgtacgacatcaaggttatgatgcgcgcctgcaacggcctaaaaggaggc
ttgcaagagctcgcggacgatctttctgtcgcacgcatcggcccctcccaccaggccggc
tcagactccctcctcaccgcctccgccttcttcaagatgcgcgacatgtacttcaaggag
tccttgcaggaccccgagaaggcggaaaaactgcgctcagaatattctggcaagctctac
ggcctcggccagacgttctccatcgcgaacggcatcgcggacccagggcgcggcggcgcg
accatcgctgagcgagaagaccgcactgtgacgcgcgagctctcacagacgcctgcgcca
gggccaggccagggcgtcagcctcgctgggcaggcggcggtcatgggcatgggcggtggt
atgggcatgcccacgcctgggtacggcccactggccaacgggccgtacatgcggacacag
atggtgggaggggcgcggtga
DBGET
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