KEGG   Schizophyllum commune: SCHCO_02616112
Entry
SCHCO_02616112    CDS       T01331                                 
Symbol
SCHCODRAFT_02616112
Name
(RefSeq) CAF1-domain-containing protein
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
scm  Schizophyllum commune
Pathway
scm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:scm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SCHCO_02616112 (SCHCODRAFT_02616112)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scm03019]
    SCHCO_02616112 (SCHCODRAFT_02616112)
Messenger RNA biogenesis [BR:scm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SCHCO_02616112 (SCHCODRAFT_02616112)
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     SCHCO_02616112 (SCHCODRAFT_02616112)
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 9585762
NCBI-ProteinID: XP_003033973
UniProt: D8PXF3
LinkDB
Position
Unknown
AA seq 346 aa
MGHIRDVWAQNLDAEMKNIRSLIEDYPYVAMDTEFPGVVARPIGQWKSTSEYHYQTMRCN
VDLLKIIQVGITLADAEGNMPPEPSTWQFNFRFSINEDMYSPDSIDLLRKSGIDFQRHEE
QGINPNDFAELMITSGLVLSPDTTWISFHSGYDFGYFVKLLTAISLPTTEDTFFELFRIW
FPSVYDIKVMMRACNGLKGGLQELADDLSVARIGPSHQAGSDSLLTASAFFKMRDMYFKE
SLQDPEKAEKLRSEYSGKLYGLGQTFSIANGIADPGRGGATIAEREDRTVTRELSQTPAP
GPGQGVSLAGQAAVMGMGGGMGMPTPGYGPLANGPYMRTQMVGGAR
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgggccacatacgggatgtatgggcacaaaacctcgacgcggagatgaagaacatccgc
agtctcatagaagactatccctatgtcgccatggacaccgagttccccggtgtcgtggcg
cgcccgatagggcagtggaagtcgacgtcggagtatcactaccagacgatgcgctgtaac
gtcgacctgctcaagatcatccaagtcggcatcacgctcgcggacgcggaggggaacatg
ccaccggagccaagtacatggcagttcaactttcgcttcagcatcaacgaggacatgtac
tccccggactcgattgatttactgcgaaaatcaggcattgactttcagcgccatgaggag
cagggcatcaacccaaacgactttgccgagcttatgatcacctctggactggtcctgtcg
ccagacacgacatggatatcattccacagtggttacgacttcggctacttcgtcaaactc
ctcaccgcaatatccctccccaccactgaagacaccttcttcgagctcttccgaatatgg
ttcccatccgtgtacgacatcaaggttatgatgcgcgcctgcaacggcctaaaaggaggc
ttgcaagagctcgcggacgatctttctgtcgcacgcatcggcccctcccaccaggccggc
tcagactccctcctcaccgcctccgccttcttcaagatgcgcgacatgtacttcaaggag
tccttgcaggaccccgagaaggcggaaaaactgcgctcagaatattctggcaagctctac
ggcctcggccagacgttctccatcgcgaacggcatcgcggacccagggcgcggcggcgcg
accatcgctgagcgagaagaccgcactgtgacgcgcgagctctcacagacgcctgcgcca
gggccaggccagggcgtcagcctcgctgggcaggcggcggtcatgggcatgggcggtggt
atgggcatgcccacgcctgggtacggcccactggccaacgggccgtacatgcggacacag
atggtgggaggggcgcggtga

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