Schizophyllum commune: SCHCO_02616339
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Entry
SCHCO_02616339 CDS
T01331
Symbol
SCHCODRAFT_02616339
Name
(RefSeq) PIN domain-like protein
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
scm
Schizophyllum commune
Pathway
scm03030
DNA replication
scm03410
Base excision repair
scm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCHCO_02616339 (SCHCODRAFT_02616339)
03410 Base excision repair
SCHCO_02616339 (SCHCODRAFT_02616339)
03450 Non-homologous end-joining
SCHCO_02616339 (SCHCODRAFT_02616339)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scm03032
]
SCHCO_02616339 (SCHCODRAFT_02616339)
03400 DNA repair and recombination proteins [BR:
scm03400
]
SCHCO_02616339 (SCHCODRAFT_02616339)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scm04147
]
SCHCO_02616339 (SCHCODRAFT_02616339)
DNA replication proteins [BR:
scm03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
SCHCO_02616339 (SCHCODRAFT_02616339)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
SCHCO_02616339 (SCHCODRAFT_02616339)
DNA repair and recombination proteins [BR:
scm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
SCHCO_02616339 (SCHCODRAFT_02616339)
Exosome [BR:
scm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SCHCO_02616339 (SCHCODRAFT_02616339)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
9585799
NCBI-ProteinID:
XP_003034004
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MGIKGLTGLLSEHAPKSMKEHEIKTLFGRKVAIDASMSIYQFLIAVRQKDGEMLTNDAGE
ITSHLMGLFYRTIRIVENGIKPAYVFDGKPPDLKKGVLSKRFEKRDEAKEGEEEAKETGT
AAEVDKFSRRQVKVTREHNEECRRLLKLMGIPYVEAPSEAEAQCAELARGGKVYAAGSED
MDTLTFNAPILFRHLTVSEAKKQPILEINLKAALEGLDMDLSMFVDLCILLGCDYLEPIK
GVGPKSALKLVREHGGLAGVVEHLRAKQAEKEEAIAAAEAEEESADEPAATSDVEAPDGD
DDEDDEAKEKKEKPKPKPKKKAKGKARGGVQIPEEWPWEEAKKLFLTPDVIPADEVELEW
KSPDVDGLVQFLVNEKGFNEERVRKGAEKLAKFLNAKQQGRLDGFFTVKPKDKPEPKGKG
AGKGKADAKGTKGTKRKGEDKAEGGTKKKTKK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcaaggggctcactggcctgctgtccgagcatgcgcccaaatctatgaaggaa
cacgagatcaagacgctctttgggcgcaaggtcgcgatagacgcgtccatgtccatctac
cagttcctcatcgcggtccgccaaaaggacggcgagatgctcacgaacgacgcgggggag
ataacgagtcacttgatgggtctgttctaccgcaccatacgcatcgtcgagaacggcatc
aagcccgcgtatgtgttcgacgggaagccaccagatctgaagaagggtgtgctctcgaag
cggtttgagaaacgtgacgaggcaaaggagggcgaggaggaggcgaaggagacgggcacg
gccgcagaggtcgacaagttctcgcgccggcaggtcaaggtcacacgcgaacacaacgaa
gagtgcaggcgcctcctgaagctcatgggcatcccatacgttgaggcgccctcagaagca
gaggcgcagtgtgcagagctcgcgcgcggggggaaggtctacgcggcgggctccgaggac
atggacaccctcacattcaacgcgcccatcctcttccgccacctgaccgtgtccgaggcg
aagaagcagcccattctcgagatcaacctcaaggcggcgctcgagggcctcgacatggat
ctcagcatgttcgtcgacctctgcatcctattgggctgcgactacctcgagcccatcaag
ggtgtcggccccaaatccgcgctcaagctcgtgcgcgagcacggcggcctcgccggcgtc
gtcgaacaccttcgtgcaaagcaggcagagaaggaggaggctatcgccgccgccgaagcg
gaggaggaatccgcagacgagcccgcggcgacgagcgacgttgaggcgcccgacggagat
gatgatgaggacgacgaggcgaaggagaagaaggaaaagccgaagccaaaacccaagaag
aaggcgaagggcaaggcgcggggtggggtgcagattcctgaggagtggccttgggaggag
gcgaagaagctgttcctcacgcccgatgtgatcccggcggacgaggtggagctcgagtgg
aagagcccggacgtcgacggcctcgtgcagttcctcgtcaatgaaaagggcttcaacgag
gagcgcgtgcgcaagggcgcggagaagctcgcaaagttcctcaacgcgaagcagcagggg
cgcctcgacggtttctttaccgtcaagccgaaagacaagcccgagcccaaggggaagggc
gcggggaagggcaaggcggacgcgaaggggacgaagggaacgaagcggaagggcgaggac
aaggcagaaggtgggacgaagaaaaagacgaagaagtag
DBGET
integrated database retrieval system
