Schizophyllum commune: SCHCO_02617748 Help Entry SCHCO_02617748    CDS       T01331                                  Symbol SCHCODRAFT_02617748 Name (RefSeq) uncharacterized protein   KO K06100   symplekin Organism scm  Schizophyllum commune Pathway scm03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:scm00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     SCHCO_02617748 (SCHCODRAFT_02617748)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:scm03021]     SCHCO_02617748 (SCHCODRAFT_02617748)    03019 Messenger RNA biogenesis [BR:scm03019]     SCHCO_02617748 (SCHCODRAFT_02617748) Transcription machinery [BR:scm03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      SCHCO_02617748 (SCHCODRAFT_02617748) Messenger RNA biogenesis [BR:scm03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      SCHCO_02617748 (SCHCODRAFT_02617748)     U7-dependent histone pre-mRNA processing factors      SCHCO_02617748 (SCHCODRAFT_02617748) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N Motif Other DBs NCBI-GeneID:  9595188 NCBI-ProteinID:  XP_050200947 LinkDB All DBs Position Unknown AA seq 1391 aa AA seqDB search MADPLNMLQAALTAEANSPAQADILIQLRTSLEAAPAPIPILVSTLISNVSGWGDSLLRT WVVDLLCFGICTPSLHVDQRTQLALSTLSTLSQLLDDASPAIVKVAIQALTGAYPLVFRQ LCITRSNPAAWETMTSAKSRILDIVRTPEGILPSGVRLAAIKFAQRAVILQSRGTSSNAP ADPRRRQQQAASADPSDASLVLCPTNHPFISPPKLEQEGARMAEFLLGMIFQTRDVATFT ALVNSYAGLVKLRPGSVHTVVSALKAWTPASLQDASAGAIKSAEKSVRILLNHINRNPAY AALHTTVSEALSAQASRIEKAAQEEKMRRAGKRPATDAGRPDAKRAKLEPAPAAVPPADG APGPASFLAAFDFTTLPASLITELVIANLGAFSDQALAVLVAKYRAEKGLGGPPPIASPQ AVPAGSSTTPPGSPPPALKAAYAQVRAQSQPPRKGSTPIPTGPRAERMKDQDRAKEDGRD KEEKGEANAPRPPPEPVDPLAMDLDQNELEFEPDALNRELGPGRDADDVAAAAPRRGARS QEDAGDVNMEVSEDEAEAEAADIDFGSIVGPGGVALPAPPRLGEGEKMALVRDAVARVWD GDGLVGGTAGLEGPELWMLLLVRMVTRVAAPPVGDAGSGEVKKADEADTEATGKSEEPEE PPAAEDASESANSAAKAEGDAANGQVVTAADVEKFYERQDALRKTLRDYIVADFSGRLSL ATTWMNEEWYNDQIHLQFMKDERWRPNYDIWLAQLVAAYETMLDDGRPEAGTQRSFAKFL LDLPAVPPDVMDLLRDLCIEGGSPNRVAVGFQTLRGFVIQRPSLRTEALTVLLELTTHPE RKTRGPAINTVKLWVPAVHPMNSIVQSFALAVMRRLTRREEPKVNGTPSADVEMQSSDTT QTNGTSFAEGALRADAPSSEQAPAGTRAGDDAQGGEITQDSNMDGVEEGEEHEEPVQTPY LPERVTGEGPEAKPQVLQHVELLFALSVKVPELLDEIFDAYGQMDPAVQNVVQELITPLI RSLGPSHSRLLTLLRTFPPHAEGLALRVLSIFTENGRPSPQLVAIVKGLVAERQDLREGA LAARFLIPVIGEMDKAEIIRYLPRIVSVLDGKAESKALVKSVFSSIVAQPPQTFGMVSSN VPRVRHNEMLTPAELMVLLHDSEKDIGLQSAKEAITICFSMTDIYRSEVLAVVIQQIMDE PVLPVLFLRTVIQAVTTYKTLVPFVATTLLSRLITKKIWTNAPLWEGFVRCAKVTAPISF GALLQLPKDQLRELVGKQPSLKAGLRDYVTKKATNKARVAGFLDIFGEGSEGSSGSAANG NGSVTSGNGNLVQSGPPTPSTPAGPPETPTGLVGSTNGTPSASATAEGTPVPLTPLTPTM TPQMEGVESTS NT seq 4176 nt NT seq  +upstreamnt  +downstreamnt atggcggaccccctcaacatgctgcaggccgccctgaccgcggaggccaactcgcccgcg caggcggacatcctcatccagcttcggacctcgctcgaggcggcccccgcgccgatcccg atcctcgtctccacgctcatcagcaatgtgtcgggctggggggacagcctgctccggacg tgggtggtggacctcctgtgctttgggatctgcacgccgagtttgcatgtggatcagcgg acgcagttggcgctctcgactctgtcgacgctctcgcagctgttggacgatgcgtcgccg gcgattgtgaaggtggcgattcaggcgctgacgggcgcgtacccgctggtgttcaggcaa ttatgcataacccggtccaaccccgccgcatgggagaccatgacctccgccaagtcccgc atcctcgatatcgtccgcactcccgaaggcatcctcccgtctggagtgcgcctcgctgcg atcaagttcgcccagcgtgctgtcatcctgcagtcgcgcggtacctcgtcgaatgcccct gcggacccgcggcgcaggcagcagcaagcggcgtcggccgatccaagcgacgcgagccta gtgctatgcccgacgaaccatccgttcatcagcccgccgaaactcgaacaggagggcgcg aggatggccgagttcctgctgggcatgatattccagactcgggacgtggcgaccttcacg gcgttggtgaactcgtatgcggggctcgtgaagctgcgccctgggtccgtgcacacggtc gtgagcgcgctcaaggcgtggacgccggcgtcgcttcaggatgcgagcgcgggcgccatc aaaagcgcggagaagagcgtcagaatactattgaaccatatcaacagaaaccctgcctac gctgccctgcataccactgtctcggaggcgctctccgcacaagcctctcgcatagaaaaa gccgcgcaggaagagaagatgcgccgcgcgggcaagcgccccgccaccgacgccgggcgc cctgatgcgaagagggcgaagctggagccggcacctgccgcggttcctcctgcggatggc gcccctgggccggcgtccttcctcgcggccttcgacttcacgacgctgccagcatcgttg atcacggaactcgtgatcgcgaacttgggcgcgttcagcgaccaggcgctcgcggtgctg gtggcgaagtatagggcggagaaggggctgggtgggcctccgccgattgcctcgccgcaa gccgtgcccgctggtagctcgacgacgccaccggggtcgccgccgcctgcgctgaaggcg gcatacgcgcaggtgcgcgcgcagtcgcagccgccgaggaaggggtcgacgccgataccg acaggcccgagggcggagcggatgaaggaccaggacagggcgaaggaggatggccgggac aaagaggagaagggagaggctaacgcgccgcgcccgccgccagagccagtcgacccgctg gcgatggaccttgaccagaatgaactggagtttgagcccgatgcactaaacagggagtta gggccggggagggatgcagatgacgtcgccgcggcggctccccggcgcggcgcgcgcagc caggaagatgcaggggacgtcaatatggaggtcagcgaagatgaggcggaggcggaggcc gccgacatcgacttcggcagcatagtgggcccaggcggggtagcgctccccgcgccgcca cggctgggtgagggagagaagatggcgctggtgcgggacgcggtcgcgagggtgtgggat ggggatgggttggtgggcgggacggcggggctggagggcccggagctgtggatgttgctg ctggtgaggatggtgacgagggtggcggcgcccccggtgggggatgcgggtagtggggag gtgaagaaggctgatgaagcagatactgaggcgacggggaagtcagaggagcctgaggaa ccaccggccgcagaggacgcatcagagtctgcgaattctgcggctaaggcggagggcgat gctgcaaacggccaggtagtgactgctgccgatgtcgagaaattctacgagcggcaggac gcgttgcggaagaccctgagagactacattgtggcggacttctccggaagactatcgtta gcgacaacatggatgaacgaggagtggtacaacgaccagatacacttgcagttcatgaag gacgagcgatggcggccgaactacgacatatggcttgctcagcttgtggccgcgtacgaa accatgctggacgatggtcggccggaggcagggacgcagcggtcgttcgccaagttcctc ctcgacctgcctgctgtgccacccgatgtgatggacttgctcagagacttgtgcattgaa ggcggaagcccaaatcgcgtggcggtcggtttccagacattgcgcggcttcgtgatacag cgaccctcattgcgaaccgaggctctgactgtgctgctcgagctcaccactcatccagaa cgcaagacacgcggtcccgccatcaacaccgtgaaactctgggtgcccgccgtccatcct atgaacagcatcgttcagagcttcgcgctcgcggtcatgcggaggctgacgaggcgggag gagccgaaggtcaacggtacaccatctgccgatgttgagatgcagtcttcagacactacg caaaccaacggcacctcgttcgcggagggagcgcttcgagccgatgcaccgtcctcagag caggcaccagccggtacccgagcaggagatgatgctcaagggggcgagatcacccaggac agcaacatggacggcgtcgaggagggagaggaacacgaggagcccgtgcagacgccgtat ctgccagaacgtgttacaggcgaggggccagaggcgaagccgcaagtgctgcagcacgtt gagctcctgttcgcgctgtccgtgaaggtaccggagctgctcgacgaaatcttcgacgcc tacggccaaatggaccccgccgtccaaaacgtcgtccaggagctgatcacccccctcatc cgctccctcgggccctcgcactcgcgcctgctgacgctcctgcgcaccttcccgccgcac gctgagggcctcgcgcttcgcgtcctgtcgatcttcaccgagaacggccggccgagtccg caactggtggccatcgtcaagggcctcgttgcggagcggcaggatctgcgcgagggcgcg ctggccgcgcgcttcttgatcccggtcattggcgagatggacaaggccgagatcatacgc tatctcccgcggatcgtgtccgtgctggatggcaaagcggagtcgaaggcgctggtgaag tccgtgtttagctcgattgtggcccagccgccgcagacgtttgggatggtgtcgtcgaat gtaccaagggtccgccacaacgaaatgctcacgcccgcggagctgatggtcctgctgcac gactccgagaaggacattgggctgcagagtgctaaagaagccatcaccatctgcttttct atgacggatatctaccgatctgaggtcctcgcggtcgtcatccagcaaattatggacgag cctgtgctgcccgtactcttcctgcgcaccgttatccaggcggtgacgacgtataagacc ttggtcccgttcgtggcgacgactttgttgagcaggctgattacgaagaaaatatggacg aatgcgccgctatgggaggggtttgtgaggtgtgcgaaggtcactgcacctatctctttt ggcgcgctcctgcagctgccgaaggaccagctgcgcgagcttgtgggcaagcagccgagc ttgaaggccgggctcagggactacgtgacgaagaaggcgacgaataaggcgagggtggcg ggtttcttggatatctttggggaggggtctgagggttcaagcgggtctgcggcgaatggg aatgggagcgtgacgagtgggaatgggaatctagtgcagtccgggccgccgacgcctagt acgccagccggaccaccggagacgccaacagggctggtggggtctacgaacgggacacca tcggcgtctgcaacggcggagggaaccccagtgcctctgacgccgcttacaccgacgatg acgccgcagatggagggtgtcgagtcaacttcttga

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