Schizophyllum commune: SCHCO_02617838
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Entry
SCHCO_02617838 CDS
T01331
Symbol
SCHCODRAFT_02617838
Name
(RefSeq) NIC-domain-containing protein
KO
K14309
nuclear pore complex protein Nup93
Organism
scm
Schizophyllum commune
Pathway
scm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SCHCO_02617838 (SCHCODRAFT_02617838)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scm03019
]
SCHCO_02617838 (SCHCODRAFT_02617838)
Messenger RNA biogenesis [BR:
scm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SCHCO_02617838 (SCHCODRAFT_02617838)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
Spectrin
Motif
Other DBs
NCBI-GeneID:
9590356
NCBI-ProteinID:
XP_003032553
UniProt:
D8Q3A6
LinkDB
All DBs
Position
Unknown
AA seq
909 aa
AA seq
DB search
MASDLSALLAASKNLTSHLSRPDLPSVQLSLDQIEAQSRRLVQRQHNTAADADRANYLLA
QAHVDASALANTISHLNTATTFSPLQQLQDTDVAGYLRHAHEQTLITTIEEGRAETQDEF
YRLLEERGQRDWEARKRRLFEELGGRLGVENRAVAEMKMSSYGRAGLGASTSAPAAPSRE
QTQKQLIYGQQIVELNKARLRGEAFAIIHALRQAAATLAGSVPGTSHQIIHLYDVLAKIT
AEPSYAVPVEHAGAHILNTAPQERRLARVYLAATSIPTGAGTATPASASTGFGSSTAFSA
STFGTSRTGTPSVGTPTGGASNLTGSPNSREAADLRRQIARGAREALEEQYWDVLERTLR
ARRVPIGGDPSDAHHVAEFVAARYYVNGEWTGGVELFQKPRPAPLWAILFTLVRTGRAEA
ALEVAVEAERAIEAREAGFVARFKAWLQAPDRQLSRMEREELQNVYNAHMLHAKSTDPFK
LALYKLMGKLEPTRRSVPVVTSTAEDWLWFQLAMVDEDTEGGLRGLAETLLGYGARHFEG
PNGRPELWAQVLLVCGQFERAVAALLGHPDTEVDGVHIAIALAYHGLLRVPSRAEASDIA
PLTIVPNSPPALNLPTVLWRYVRPFVKHGAEDALQYVYFVCLSADQGGEVGREQVEIAWE
LVRRIIVLSNGGPTWERLVGGFRADGTRTPGTIEQHMSLLKLRSKQQYNEQILVRAAKES
EDNDRTAEAIKLYNLAEDYATVVSCLARALGNTIAQTAPDAKCRTLERTAEQILDHYART
NRAAGKDKDAVAKLLKIRRAMDLRNAGELQRAMDVLDSTDLLVVDNDLVKISKRAEEFKD
LHEALQRNFPLYTRLYMDILHQIKQSETRTYVDSQLAKKGRSVAVLAGMLKYRMPPDVLS
YINRLSVEL
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgacctgtcggccctcttggccgcgtccaagaacctcacgtcccacctttca
cgacccgacctgccctctgtgcagctgtccctcgaccagatcgaggcgcagtcacgacga
ctagtccagcgccagcacaacaccgccgccgatgcggatcgcgccaactacctactcgcg
caagcgcacgttgacgcgtctgcactcgcaaacacgatctcgcacctgaacaccgcgacg
accttctcaccactgcagcagctccaggacaccgatgtggccggctacctgcgccacgcg
catgaacagaccctcattaccaccatcgaggagggccgcgcggagacgcaggatgagttc
tatcggttgttggaggagagggggcagcgggactgggaggcgaggaagaggcgactgttt
gaggagctcggaggacgcctgggcgtggagaatagggcggtggctgagatgaagatgagc
tcgtacgggcgggctgggctgggggcaagcacgagcgccccggcggctccaagcagggag
cagacgcagaagcagctcatctatggccagcaaatcgtcgagctcaacaaggcgcgtctt
cgcggcgaggcttttgctatcatacatgccctgcgtcaggctgctgccactcttgcaggc
agtgtgccgggcacctctcaccaaatcatccacctctatgatgtccttgcgaaaatcaca
gccgagcccagctacgcagtccccgtcgagcacgcaggcgcacacatactcaacacggcc
cctcaagagcgccgtcttgctcgcgtatacctcgcggctacctctatccctaccggagct
ggcactgctacccctgctagtgcatctaccgggtttggttcctctaccgcattcagcgcc
tccaccttcggcacatccaggacgggtacaccctccgtcggaacccccaccggcggcgcc
tccaacctcaccggctcccccaactctcgggaggccgcggacctcaggaggcagatcgcc
cgcggcgcaagggaggcgttggaggagcagtactgggatgtgctggagaggacgctacgc
gcgcggagggtgccgattggcggagacccgagcgacgcccaccatgtagcggagttcgtg
gcggcgaggtattatgtgaatggggagtggacgggcggggtggagctcttccagaagccg
cgcccggcgccgttgtgggcgatcctgttcacgctggtgcgcacggggcgcgcggaggcg
gcgctcgaggtcgcggtggaggctgagcgcgcgatcgaggcgcgggaggcagggtttgtg
gcgcggttcaaggcgtggctgcaggcgccggataggcaactctcccgcatggagcgcgag
gagctgcagaacgtctacaacgcgcacatgctgcacgccaagtcgacggacccgttcaag
ctggcactgtacaagctgatgggcaagctcgagccgacccgccggagcgtgccggtggtg
acgagcacggcggaggactggttgtggttccagctggctatggtcgatgaggataccgaa
ggcggcctccgtgggcttgcggagacattgctagggtatggcgcacgccactttgagggg
ccgaacggcaggccggagctgtgggcgcaggtgctcttggtttgtgggcaattcgagagg
gccgtcgcggcgctgctaggtcatcccgacacagaggtcgacggtgtgcatattgctatc
gcgctggcgtaccacggactgctccgcgtaccttcgagggcggaggcgtcggacattgct
cctctaaccattgtccccaactctccgcccgcgctcaacttgcccaccgtcctctggcgc
tacgttcgtccgttcgtgaagcacggtgcggaggatgcactccagtatgtgtacttcgtg
tgcttgtcggcggaccagggcggcgaggtgggtagggagcaggtggagattgcgtgggag
ctggtgcggaggattattgtgctgagcaatgggggcccgacgtgggaaaggttggttggt
gggttcagggcggatggtacgaggacgcccggcaccatcgagcagcacatgtcgctgctc
aagctgcgctccaagcaacagtacaacgagcaaatcctcgttcgcgcggcgaaggagtcc
gaggacaacgaccgtacggcggaggctatcaagctgtacaaccttgccgaggactacgct
accgtcgtgtcttgcctggctcgcgcgttgggcaacacaatcgcgcagacggcgccggac
gcgaagtgccgcacgctggagcggacggcggagcagatcctcgatcactacgcgcgcacg
aaccgggcggcgggcaaagacaaggacgcggtggcgaagttgctgaagatccggcgcgca
atggacctgcggaacgcgggcgagctgcagcgggcgatggacgtgctggactcgacggac
ctgctggtggtggacaacgacctggtcaagatcagcaagcgggcggaggagtttaaggat
ctgcacgaggcgttgcagaggaacttcccgctttatacgcggttgtatatggatattctg
caccagatcaagcagtcggagacgaggacgtacgtggactcgcaacttgccaaaaagggg
cggtctgtcgctgtgttggctggcatgctcaaataccggatgccgcccgatgttctgtcg
tatatcaaccgtttgagtgtagagttgtag
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