Schizophyllum commune: SCHCO_02618639
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Entry
SCHCO_02618639 CDS
T01331
Symbol
SCHCODRAFT_02618639
Name
(RefSeq) RNA-binding domain-containing protein
KO
K12876
RNA-binding protein 8A
Organism
scm
Schizophyllum commune
Pathway
scm03013
Nucleocytoplasmic transport
scm03015
mRNA surveillance pathway
scm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SCHCO_02618639 (SCHCODRAFT_02618639)
09122 Translation
03013 Nucleocytoplasmic transport
SCHCO_02618639 (SCHCODRAFT_02618639)
03015 mRNA surveillance pathway
SCHCO_02618639 (SCHCODRAFT_02618639)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scm03019
]
SCHCO_02618639 (SCHCODRAFT_02618639)
03041 Spliceosome [BR:
scm03041
]
SCHCO_02618639 (SCHCODRAFT_02618639)
Messenger RNA biogenesis [BR:
scm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
SCHCO_02618639 (SCHCODRAFT_02618639)
Spliceosome [BR:
scm03041
]
Complex C
Other components
EJC/TREX
SCHCO_02618639 (SCHCODRAFT_02618639)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
9590690
NCBI-ProteinID:
XP_003032707
UniProt:
D8Q0S0
LinkDB
All DBs
Position
Unknown
AA seq
162 aa
AA seq
DB search
MSDDEMNIDDVASGGAVRRRGRGFQTSRGGGDSQVGGTDHTYDRVESTKETDTRAQRSVE
GWIIMVTNVHEEATEEDVNDKFAEYGEIKNMHLNLDRRTGYVKGYALVEYETMAEAQAAI
DGASGSSLLEQVIQCDYAFIRPPPTGPRRNARGRSASPTRRR
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgatgagatgaacattgacgatgtggcctccggaggcgccgtccgccgcagg
ggccgtggcttccagacttccaggggaggcggtgactcgcaagtcggagggaccgatcac
acctacgatcgcgtcgagtcgacgaaggagacggataccagggcccagcgatccgtcgaa
ggatggatcatcatggtcaccaacgtgcacgaagaggctactgaggaggacgtgaatgac
aagtttgcggagtacggcgagattaagaacatgcatttgaacctcgaccgtcggacgggt
tatgtgaagggatacgcgctcgtggagtacgagacgatggcagaggcgcaggctgcgatc
gacggcgcctcgggctcttcccttctggagcaggtcattcaatgtgactacgccttcatc
cgtcccccacctactggccctcggcgcaatgctcgcggtcgtagcgcaagccctacgcgt
cgccgctag
DBGET
integrated database retrieval system
