Schizophyllum commune: SCHCO_02619509
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Entry
SCHCO_02619509 CDS
T01331
Symbol
SCHCODRAFT_02619509
Name
(RefSeq) WD40 repeat-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
scm
Schizophyllum commune
Pathway
scm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SCHCO_02619509 (SCHCODRAFT_02619509)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scm03041
]
SCHCO_02619509 (SCHCODRAFT_02619509)
Spliceosome [BR:
scm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
SCHCO_02619509 (SCHCODRAFT_02619509)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
PRP4
Beta-prop_Aladin
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
WD40_like
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_IFT140_1st
RMC1_N
Tricorn_2nd
WD_LRWD1
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
9590979
NCBI-ProteinID:
XP_050201229
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MELTYDTLMDDGNYLGSERARAENQALLDELERKKKARAMAVPTDDNRVKMRLREIGEPI
TLFGERAADRRDRLIYVLSQINAARGDDGMQMEVESDSESEEEEEEFYSPGSLELLEARR
RIAEFSLPRAQKRVAQQRLETKIELKRLVDIRKKVFGNVKRFANLGSQIGDERPISQVRF
SPNNEMLATGSWSGCVRLWRVPSCTPIRTLRGHSDRVGGVAWHPQATLSLGPDQVNIASG
AGDNCVNLWSLNSDQPLAILQGHQGRVCRVAFHPSGDYVASASFDTTWRLWDVNTQKELL
LQEGHSKEVYSVEFQDDGALIASGGLDAIGRVWDLRTGRTAMVLDGHVQPIYSMSFSPNG
YQIATGAGDDTIRIWDMRSLKALYTIPAHLSNVSDVRFFRANDKFFVEPTATTQDADVEM
KDETSAQNGDAAKVSSQNGDAKDGDGGEAKDSQDAAADKSSDKPDTSAYTWEEWKYRSGL
FFASAGYDGLVKLWSADDWQLLRTLSTDAGKVMSCDITSDGGMIASGTYNRNFQLYGMED
VV
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggagctcacatatgataccttgatggacgatggcaactacctgggctccgaacgcgca
cgcgccgagaaccaggcgctgctcgatgagctcgagcgtaagaaaaaggcgcgcgctatg
gcggtcccgaccgacgacaaccgcgtcaagatgcgcctgcgagagattggggaacctatc
acgctttttggcgaacgcgcagcagacaggagagatcgtctcatctatgtgctgtcccaa
atcaacgccgcgcggggggacgacgggatgcagatggaggtcgagtcagactcagagagc
gaggaggaggaagaagaattctactcccccggatcgctggagctgcttgaggcgcggcgg
cgaatagccgagttctctctccccagagctcagaagcgcgtcgcccagcagcgtctggag
accaagatcgagctcaagcggctcgttgatatacggaagaaggtttttggcaacgtcaag
cgcttcgcaaacttgggctcccagatcggcgatgagcgacctatctcgcaggtccgcttc
tcccctaacaacgaaatgctggcgacaggtagctggtcaggctgcgttcgactgtggcgc
gtcccatcttgtacccctatccgcaccctccgaggtcacagcgaccgcgtcggcggcgtc
gcatggcatcctcaagccaccctatcccttggtcccgaccaagttaatattgcaagcggc
gcgggagacaactgtgtcaatctgtggtcactcaacagtgaccagccgctagcgatcctg
caaggacaccaaggccgcgtatgtcgcgttgcgttccatccttcgggcgactatgtcgcg
agtgcgagcttcgatacgacgtggaggttgtgggatgttaatacacagaaggagctgtta
ttgcaggagggtcactcgaaagaggtctactccgttgaatttcaggacgacggcgcgttg
attgcgtctgggggccttgacgcaattggacgcgtatgggacctacgtacaggacgcact
gcaatggtcctcgacgggcatgtacagccaatctactcaatgtctttctcccccaacggc
taccaaatcgctactggcgccggagacgacaccatacgcatatgggacatgcgctcacta
aaagcgctatacaccatccccgcccacttgtccaacgtctccgacgttcgcttcttccgt
gcgaacgacaagttctttgtcgagcctaccgctacgacgcaggacgcggacgtggagatg
aaggacgagacgtcggcgcaaaatggggacgcggcaaaagtgagctcgcagaatggcgac
gcgaaagacggggatggcggtgaggcgaaagactcccaagacgccgccgccgacaaatcc
tccgacaagcccgacacctctgcatacacctgggaagagtggaagtatcgctcgggcttg
ttcttcgcgagcgcgggctacgatggcctcgtcaagctctggagtgcagacgactggcag
ttgctcaggacactgtcgacggacgcgggcaaggttatgtcgtgcgatataaccagtgac
ggggggatgattgcgtcagggacgtacaatcggaacttccagttgtatgggatggaggat
gtggtttag
DBGET
integrated database retrieval system