Schizophyllum commune: SCHCO_02620059
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Entry
SCHCO_02620059 CDS
T01331
Symbol
SCHCODRAFT_02620059
Name
(RefSeq) AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
scm
Schizophyllum commune
Pathway
scm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SCHCO_02620059 (SCHCODRAFT_02620059)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scm03019
]
SCHCO_02620059 (SCHCODRAFT_02620059)
03009 Ribosome biogenesis [BR:
scm03009
]
SCHCO_02620059 (SCHCODRAFT_02620059)
04131 Membrane trafficking [BR:
scm04131
]
SCHCO_02620059 (SCHCODRAFT_02620059)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scm04147
]
SCHCO_02620059 (SCHCODRAFT_02620059)
Messenger RNA biogenesis [BR:
scm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
SCHCO_02620059 (SCHCODRAFT_02620059)
Ribosome biogenesis [BR:
scm03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
SCHCO_02620059 (SCHCODRAFT_02620059)
Membrane trafficking [BR:
scm04131
]
SNARE
SNARE associated proteins
Others
SCHCO_02620059 (SCHCODRAFT_02620059)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
SCHCO_02620059 (SCHCODRAFT_02620059)
Exosome [BR:
scm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SCHCO_02620059 (SCHCODRAFT_02620059)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_33
AAA_5
CDC48_2
AAA_2
AAA_16
TIP49
AAA_22
AAA_14
Mg_chelatase
AAA_28
RNA_helicase
AAA_lid_PRS2_C
nSTAND3
Parvo_NS1
AAA_7
ATPase
AAA_17
Vps4_C
NPHP3_N
AAA_18
AAA_25
AAA_24
ABC_tran
IstB_IS21
DUF815
ResIII
TsaE
NB-ARC
NACHT
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
9596037
NCBI-ProteinID:
XP_003032937
LinkDB
All DBs
Position
Unknown
AA seq
814 aa
AA seq
DB search
MADPSGAAPQPGENDVSTAILRPKKSPNRLIVDEATADDNSVATMNPATMETLQLFRGDT
IIVRGKKRRDTVLICLSSDDVEEGRIQMNKVARNNLRVKLGDLVNVHQCLDIKYGKRVHI
LPFDDSIEGLSGNIFDVYLKPYFLEAYRPVRKGDTFLVRGGMRTVEFKVIETDPAEYCIV
AQDTVIHTEGDPVKREDEESNLADVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIK
PPRGILMFGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKN
SPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGLKARSNVVVMAATNRPNSIDPA
LRRFGRFDREVDIGIPDPTGRLEILRIHTKNMKLADDVDLEQIAADTHGYVGSDIASLCS
EAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTMDNFRFALGTSNPSALRETVVEVPTVTW
DDIGGLDKVKLELQETVQYPVEHPDKFLKYGMSPSKGVLFYGPPGTGKTMLAKAIANECN
ANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVMFFDELDSIAKARGSSSGDAGGA
GDRVLNQILTEMDGMNSKKNVFIIGATNRPDQIDSALLRPGRLDQLIYIPLPGEAERLSI
LKATLKKSPLAPDVDLNFLAQKTHGFSGADLTEICQRAAKLAIRASIEADIRRAREKAKN
EDGDAKMEEDAEEEDPVPEITREHFEEAMKFARRSVSDQDIRRYEMFAQNLQQARGFGNN
FKFPDTQGESSGQQQQAAGNAGFTEDAGDDDLYA
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccccagcggtgctgctccccagcctggcgagaacgacgtctcgacggccatc
ctcaggccgaagaaatcccccaaccgcctcatcgtcgatgaggccactgcagatgacaac
tctgtcgcgactatgaaccccgcgacgatggagaccctgcagctcttccgcggcgatacc
atcatcgttcgtggcaagaagcggcgcgacactgtcctgatctgcctgagctccgacgat
gtcgaggagggccggatacagatgaacaaggtcgcgcgcaacaacttgcgcgtcaagctt
ggcgatctcgtcaacgtgcaccaatgtctcgatatcaagtacggcaagcgcgtccacatt
ctgcccttcgacgactccatcgagggactgagcggcaacatcttcgacgtgtacctcaag
ccttacttccttgaagcctaccgcccggtgcgcaagggcgacaccttcctcgttcgcgga
ggcatgcgaacagtcgagttcaaggtcatcgagaccgacccggcagaatactgtatcgtt
gctcaggacaccgtcatccacaccgagggtgaccctgttaagcgtgaagacgaagagtcc
aacctcgccgatgtcggctatgacgacattggtggctgccgcaagcagatggcgcagatt
cgtgagctcgtcgagctgcccttgaggcatccccagctcttcaagtcgatcggtattaag
cctcctcgtggtatcctcatgttcggtcctcccggtacgggtaagaccctcatggcacga
gctgtggcgaatgagactggcgcgttcttcttcctcatcaacggccctgagatcatgtcg
aagatggctggtgaatccgagagcaacttgcgaaaggcgttcgaggaggctgagaagaac
tcgcctgctatcatcttcattgatgagatcgactccatcgcgccgaagcgtgagaagacg
aacggtgaagtcgagaggcgcgttgtctcgcagctcctgacgctcatggacggcctcaag
gcccgctctaatgttgtcgttatggctgcgactaaccgtccgaactccatcgacccggct
cttcgtcgttttggtcgcttcgaccgtgaagtcgacatcggtattcctgaccccaccggc
cgtctcgagatcctgcgcatccacacgaagaacatgaagcttgctgatgatgtcgacctt
gagcagatcgccgctgacacccatggctatgtcggctccgatattgcgtccttgtgctct
gaagctgctatgcagcagattcgtgagaaaatggacctcatcgacctcgacgaggacacc
atcgacgccgaggtgctcgactcgctcggtgttaccatggacaacttccgcttcgccctc
ggtacctccaacccatccgcgctccgcgagaccgttgtcgaggtgccgaccgttacctgg
gacgatattggtggcctcgacaaggtcaagctcgagttgcaggagaccgtccagtacccc
gtcgagcaccccgacaagttcctcaagtacggcatgtcgccatcaaagggtgtcttgttc
tacggcccgccgggtacgggtaagactatgttggcgaaggcaattgcgaacgagtgcaat
gccaacttcatctccatcaagggccctgaactgcttaccatgtggttcggtgagtctgag
gccaacgtccgcgacgtcttcgacaaggctcgcgccgccgcaccttgcgtgatgttcttc
gatgagttggactccatcgcaaaggcccgtggcagctcatccggcgatgctggtggtgct
ggcgaccgtgtgttgaaccagatcctcacggagatggacggcatgaactcgaagaagaac
gtcttcatcatcggcgcgacgaacaggccagaccagatcgactctgcgctcctccgtccc
ggtcgtctcgaccagctcatctacatccccttgcccggcgaggccgagcgtctgagcatc
ttgaaggcgaccctgaagaagtcgccgctcgcgccggacgtcgacctcaacttcctcgcg
cagaagacgcacggcttctctggtgctgacttgacggagatctgccagcgcgccgccaag
ctcgccatccgcgcgagcatcgaggccgatatccgccgcgcacgcgagaaggccaagaat
gaggacggcgacgcgaagatggaggaggacgcggaggaagaggacccggtaccggagatc
acgcgggaacacttcgaggaggcgatgaagttcgcgcgccgctccgtgtcggaccaggac
atccgccgctacgagatgttcgcgcagaacctgcagcaggcgcgtggctttgggaacaac
ttcaagttcccggacacgcagggcgagtcgtcagggcagcagcagcaggcggcgggcaac
gctggcttcacggaggatgcgggcgatgatgacctttacgcgtaa
DBGET
integrated database retrieval system
