Schizophyllum commune: SCHCO_02620320
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Entry
SCHCO_02620320 CDS
T01331
Symbol
SCHCODRAFT_02620320
Name
(RefSeq) uncharacterized protein
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
scm
Schizophyllum commune
Pathway
scm03020
RNA polymerase
scm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SCHCO_02620320 (SCHCODRAFT_02620320)
09124 Replication and repair
03420 Nucleotide excision repair
SCHCO_02620320 (SCHCODRAFT_02620320)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scm03021
]
SCHCO_02620320 (SCHCODRAFT_02620320)
03019 Messenger RNA biogenesis [BR:
scm03019
]
SCHCO_02620320 (SCHCODRAFT_02620320)
03400 DNA repair and recombination proteins [BR:
scm03400
]
SCHCO_02620320 (SCHCODRAFT_02620320)
Transcription machinery [BR:
scm03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
SCHCO_02620320 (SCHCODRAFT_02620320)
Messenger RNA biogenesis [BR:
scm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SCHCO_02620320 (SCHCODRAFT_02620320)
DNA repair and recombination proteins [BR:
scm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
SCHCO_02620320 (SCHCODRAFT_02620320)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
9592802
NCBI-ProteinID:
XP_050201362
LinkDB
All DBs
Position
Unknown
AA seq
170 aa
AA seq
DB search
MFFIKELTHSILLHPSFFGPQMTSFLEAKLYADVEGTCSGRFGYIIAVVSILDIGKGMVM
SGSGQAEFITRYRAIVFKPFKGEVVDGVVNNVTKMGFFADVGPLTVFVSHQLIHPDMKFD
PNSNPPSFASEDAIIEKNTKVRLKIVGTRVDATEIFAIGTIKEDHLGVIE
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcattaaagaactcacgcactcgatcctcttgcacccctcgttctttgggccg
cagatgacgagcttcctggaggcgaagctctacgcggacgtcgaggggacctgctccggt
cgctttggctacatcattgcggtcgtcagcatcctcgacatcgggaagggcatggtcatg
agcggcagcgggcaggctgagttcatcacgcggtatcgggccattgtgttcaagccgttt
aagggagaggtcgtggatggcgtggtcaacaatgtcacgaagatgggattcttcgcggac
gttggaccgttgacggtgttcgtgtcacatcagctcatccacccggacatgaagttcgac
cctaactccaatccaccatccttcgcttctgaagatgcaatcatcgagaagaacacgaag
gtccggttaaagatcgtcggcacgcgtgttgacgctacggaaatcttcgcgattggcaca
ataaaggaagaccacttgggcgtgatcgagtag
DBGET
integrated database retrieval system