KEGG   Schizophyllum commune: SCHCO_02620320
Entry
SCHCO_02620320    CDS       T01331                                 
Symbol
SCHCODRAFT_02620320
Name
(RefSeq) uncharacterized protein
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
scm  Schizophyllum commune
Pathway
scm03020  RNA polymerase
scm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:scm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SCHCO_02620320 (SCHCODRAFT_02620320)
  09124 Replication and repair
   03420 Nucleotide excision repair
    SCHCO_02620320 (SCHCODRAFT_02620320)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scm03021]
    SCHCO_02620320 (SCHCODRAFT_02620320)
   03019 Messenger RNA biogenesis [BR:scm03019]
    SCHCO_02620320 (SCHCODRAFT_02620320)
   03400 DNA repair and recombination proteins [BR:scm03400]
    SCHCO_02620320 (SCHCODRAFT_02620320)
Transcription machinery [BR:scm03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     SCHCO_02620320 (SCHCODRAFT_02620320)
Messenger RNA biogenesis [BR:scm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SCHCO_02620320 (SCHCODRAFT_02620320)
DNA repair and recombination proteins [BR:scm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      SCHCO_02620320 (SCHCODRAFT_02620320)
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 9592802
NCBI-ProteinID: XP_050201362
LinkDB
Position
Unknown
AA seq 170 aa
MFFIKELTHSILLHPSFFGPQMTSFLEAKLYADVEGTCSGRFGYIIAVVSILDIGKGMVM
SGSGQAEFITRYRAIVFKPFKGEVVDGVVNNVTKMGFFADVGPLTVFVSHQLIHPDMKFD
PNSNPPSFASEDAIIEKNTKVRLKIVGTRVDATEIFAIGTIKEDHLGVIE
NT seq 513 nt   +upstreamnt  +downstreamnt
atgttcttcattaaagaactcacgcactcgatcctcttgcacccctcgttctttgggccg
cagatgacgagcttcctggaggcgaagctctacgcggacgtcgaggggacctgctccggt
cgctttggctacatcattgcggtcgtcagcatcctcgacatcgggaagggcatggtcatg
agcggcagcgggcaggctgagttcatcacgcggtatcgggccattgtgttcaagccgttt
aagggagaggtcgtggatggcgtggtcaacaatgtcacgaagatgggattcttcgcggac
gttggaccgttgacggtgttcgtgtcacatcagctcatccacccggacatgaagttcgac
cctaactccaatccaccatccttcgcttctgaagatgcaatcatcgagaagaacacgaag
gtccggttaaagatcgtcggcacgcgtgttgacgctacggaaatcttcgcgattggcaca
ataaaggaagaccacttgggcgtgatcgagtag

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