Schizophyllum commune: SCHCO_02621364
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Entry
SCHCO_02621364 CDS
T01331
Symbol
SCHCODRAFT_02621364
Name
(RefSeq) DEAD-domain-containing protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
scm
Schizophyllum commune
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scm03009
]
SCHCO_02621364 (SCHCODRAFT_02621364)
Enzymes [BR:
scm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SCHCO_02621364 (SCHCODRAFT_02621364)
Ribosome biogenesis [BR:
scm03009
]
Eukaryotic type
Pre-60S particles
Helicases
SCHCO_02621364 (SCHCODRAFT_02621364)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
CTE_SPB4
CTT_SPB4
Helicase_C
ResIII
SBF_like
Cas3-like_C_2
PcRGLX_3rd
Motif
Other DBs
NCBI-GeneID:
9597444
NCBI-ProteinID:
XP_003037829
UniProt:
D8PNX7
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MASSTAYAGSWSSLSTPLTPWIADVVASLGYTQMTPVQAATIPLFMKNKDVVVEAVTGSG
KTLAFVIPILERLIRREAKLKRNEVGALIISPTRELATQIHSVFSLFLQAQPVEEVSEYE
EGKEPEREYPDPLLLISSDQSSPAQDVQRLLETGADIVIGTPGRVEEFLLGRGQGTVSVK
ELEVLVLDEADRLLDLGFQLSLTRILTHLPKQRRTGLFSATMTDALGELIRAGLRNPARA
VVKVQSKQTRKGANAGEVIEERRIPANLENLYIPCRTSEKLVQLARIIQTEAATRAASHL
IVYLSTGACVDYFYRILPRVFPSTSSNPIVPVFHSLHGNLPPAARSRTLHAFSSALATPQ
APAVLLATDVAARGLDIPHVDVVVQVEPPTDPKAFSHRCGRTARAGRSGRAYVLLCGREV
EYVDFMAVRKIPLKPHPYIRSDASANMETDEEEDDRPEDPDVAIVQSAIRTFVRTDRTLH
DLGAKALVSAVQAYSKHQASYIFRLKDLDIVGMAKSFGLLRLPRMPELKGIDPAARGWED
ADVDFATYAYADKAQETKRLTELAARQVQAASRADAAAQRRERKKTNTAWSAQKDRQEER
QRRKEKKVSKRKWERKEAAAKEGKGGDAEKDGVGGKGTACAMDVDGEGKEGETATVPAKR
GASPDDEGADDWAELAREERMAKKVKRGAVSQKAFDAEFGDL
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcatcctccaccgcgtatgctggatcctggtcctccctctcgacacctttgacacca
tggatcgcagacgtcgtcgcatccctcggctatactcagatgacgcctgtgcaggcggcg
actatcccactcttcatgaagaataaggacgtcgtagtggaagccgttactggatccggg
aaaaccttggcctttgttattcccatcctcgagcgtcttatcaggcgagaagcgaaactg
aagcggaacgaagtcggcgcgctgatcatcagtccaacacgggaacttgctactcagatc
cactctgttttctctctctttctccaggctcagccagtagaagaagtatccgagtatgag
gaggggaaagagcccgaacgagagtaccccgatcccctcctcctcatatcctccgatcaa
tcttctcctgcgcaagatgtccagcgccttctagagaccggcgctgacattgtcatcgga
accccgggacgagtcgaggagtttcttctcggtcgcggacagggcactgtcagcgtaaag
gagcttgaggttcttgtcctcgacgaagcagacagactactcgatcttggcttccaattg
tcgcttacacgcattctgacccatctgcccaagcagcgtcgcactgggctgttcagcgcc
accatgacggacgccctcggagaactcatccgcgcgggcctgcgaaatcccgcacgagcg
gtagtcaaagtccagtccaagcagacccgcaaaggtgcgaatgcaggtgaagtcattgag
gagcgtcgaatacccgccaacctcgaaaatctttatatcccctgccgcacctccgagaag
ctcgtccagctcgcgcgcatcatccagaccgaggccgccacccgcgctgcctcccacctt
atcgtctacctctccaccggcgcctgcgtcgactacttctaccgcatcctgccgcgcgtc
ttcccctccacctcctctaatcccatagtcccggtcttccactccctgcacggtaacctg
cctccggctgcgagatcacggacgctgcatgcgttctcgagcgcgctggcgacgccgcag
gcgccggcggtgctgttggcgacggatgtggcggcgagggggctggatattccgcatgtg
gatgtggtggtgcaggtcgagccgccgacggaccccaaggcgttcagccatcggtgtggg
cggacggcgcgcgcagggcggagtggtcgcgcgtatgttctgctttgcgggagggaggtc
gaatatgtcgactttatggctgtccgcaagattcccttgaaacctcatccttacatccgc
tccgatgcatctgccaacatggaaacagacgaagaggaagatgaccgcccggaggacccc
gacgtcgccatcgtccagtccgccattcgcaccttcgtccgcaccgaccgcacactacat
gacctcggcgcaaaagcactcgtctccgccgtacaagcgtactcgaagcaccaggcgtcg
tacatcttccgactgaaggatctcgatatcgtcggcatggcaaagtcgttcgggttgttg
agattaccgcgtatgccagagttgaagggcatcgacccggcggcgagggggtgggaggat
gcggatgtggatttcgccacctacgcctacgccgacaaagcccaggaaaccaaacgcctc
accgagctcgccgcgcgccaggtccaagccgcttcccgcgcggacgccgccgcacagcgt
cgcgagcgcaagaagacaaatacggcgtggagcgcgcagaaggaccggcaggaagagcgg
caacgaaggaaggagaagaaagttagcaagagaaagtgggagaggaaggaggcagcggcc
aaggaggggaagggtggcgatgcagagaaggatggagtgggagggaagggcacggcatgt
gcgatggacgtggatggggaggggaaggaaggggagacggcgacagtgccggcgaaaagg
ggcgcgtcgccggacgatgagggagcggacgattgggcagagttggcgcgcgaggagcgc
atggcgaagaaggtcaagaggggcgcggtcagccagaaggctttcgatgccgagtttggt
gacctgtaa
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