Schizophyllum commune: SCHCO_02627251
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Entry
SCHCO_02627251 CDS
T01331
Symbol
SCHCODRAFT_02627251
Name
(RefSeq) NTF2-like protein
KO
K14284
nuclear RNA export factor
Organism
scm
Schizophyllum commune
Pathway
scm03008
Ribosome biogenesis in eukaryotes
scm03013
Nucleocytoplasmic transport
scm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SCHCO_02627251 (SCHCODRAFT_02627251)
03015 mRNA surveillance pathway
SCHCO_02627251 (SCHCODRAFT_02627251)
03008 Ribosome biogenesis in eukaryotes
SCHCO_02627251 (SCHCODRAFT_02627251)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scm03019
]
SCHCO_02627251 (SCHCODRAFT_02627251)
03009 Ribosome biogenesis [BR:
scm03009
]
SCHCO_02627251 (SCHCODRAFT_02627251)
Messenger RNA biogenesis [BR:
scm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SCHCO_02627251 (SCHCODRAFT_02627251)
mRNA cycle factors
Stress granule specific factors
SCHCO_02627251 (SCHCODRAFT_02627251)
Ribosome biogenesis [BR:
scm03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
SCHCO_02627251 (SCHCODRAFT_02627251)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
TAP_C
LRR_NXF1-5
NTF2
LRR_9
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
9592697
NCBI-ProteinID:
XP_003032040
UniProt:
D8Q3Y4
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MPTPAAPAPPRNLASATLRSVGLAGNKRKATDSEGDAKMRDATHHDKPGGRKTNSRLRSH
RMNPIEQYKNTGPSSAKATAGRKAVAAAAASDSLSIRGASRVGSSLSSTRARRNAVSESP
SRIPVRASVSTVAKLREFVHSRWNPEARFLNLEAMSQDPIVKKNHLTVPGVISHRNMQDA
AREAAVLYKLASELKPEVQTLSLANNNLRGDHLKSLNHYLPKLENLSLVNNQLRVMRDLD
HIAARKGKMVHLRELLLGGNPVRETEYQHNRGEQYRLEMARRFTTLELLDQEPIMKISFD
VPEAASSSSTPVPVTKSTSFPLPMGGSFITGVDGVLINNFLMRYFPTFDNQRAGLIDVYD
DASYFSYSVNATIPIRARIQGLHYKMANNKKLVWNNWFTAVEGGSRNLNRLQGGEMTHRS
LHTGPQAIMETLCKLPGTRHDMASTSEKFCIDAFPVKHGTSMALMLVVHGEFTEVGPEGI
RSFDRTFLLAPAADGSRAKAAGWDVAILNDQLMVRAYSSPEVWAMGPLQVQAQGPVQKPK
PIPTPVLPPAQQAALDAVPELQRPMVLELCRRSGLTVSYSVECLVGNSWDLDRAWANFEA
VKTTLPPDAFTAVI
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaccagccgcgccggcgccgccgcgcaatctcgccagcgccacgctgcgcagc
gtcggcctcgctggcaacaagcgcaaggcgactgacagcgagggcgacgccaagatgcgc
gacgcgacgcaccacgacaagcccggcgggcgcaagaccaactcgcgcctccggtcccac
cgcatgaaccccatcgaacagtacaagaacaccggcccctcgagcgctaaagcgaccgct
ggccgcaaagcagtcgcagccgctgcggcatcggactcgctttcgatccggggcgcgtcc
cgcgtcggcagctcgctgagctcgacgcgcgcgcgacgaaacgcggtctcggagtcccca
tcaaggatacccgtccgcgcctccgtcagcaccgtcgccaaacttagggaattcgtgcat
agtagatggaacccagaagcgcgctttttgaatctcgaggccatgtctcaagaccccatc
gtcaagaagaaccacctcaccgttcctggagtcatttcgcacagaaatatgcaagacgct
gctcgcgaagccgctgtcctgtacaagcttgcctcagagctcaagcctgaggttcagacg
ttgtcactggcaaacaacaatttgcgcggcgaccatctgaagtcgctcaaccactaccta
cccaaactcgagaacctgtcactcgtgaacaaccagttgcgagtcatgcgggatttggat
catatagctgctcgcaagggcaagatggtccatctgcgggaactcttgcttggtggtaat
cctgtacgagagacagagtaccagcataatcgtggcgagcagtatagacttgagatggca
cggcgctttacaactcttgagctgctcgaccaggaaccgatcatgaagattagtttcgac
gtccccgaggcggcatcttcatcatctacccccgtgccggtgaccaaatcaacgtcgttc
ccgttacctatgggtggctcgttcataaccggtgtggatggcgtacttatcaacaatttc
ctcatgcgctacttccccacgttcgacaaccaacgggctgggttgatagacgtatacgac
gacgcctcctacttctcctactccgtcaacgccactatacctatccgcgcacgtatacaa
ggcctgcactacaagatggccaacaacaagaagctggtttggaacaactggttcacggcc
gtcgaaggtggctcaagaaaccttaaccgcttacaaggcggggagatgacccatcggagc
ctgcacaccggaccgcaggcgataatggagacgctatgcaagttgccgggcacacgccat
gatatggcgtccacgagcgagaagttctgcatcgatgcgttcccggtcaagcacggcacg
agtatggccctcatgctcgtcgtgcatggcgagtttaccgaagtcggaccagagggcatt
cgttcttttgatcggacgttcttactggcgccagccgctgatggctcgcgtgcgaaagcc
gccggctgggatgtcgcgatcctgaacgatcagcttatggtgcgcgcctactcgagcccc
gaggtgtgggccatggggccgctgcaagtgcaggcgcaggggccggtacagaagccgaag
cctatacctacacctgttctcccgcccgcgcagcaggcggcgctcgatgccgtgccggaa
ctgcagcgacccatggtgctcgagctctgccgccgttctgggttgactgtcagctactcc
gtcgagtgtctggtgggcaattcgtgggatctggatagagcgtgggcgaacttcgaagcg
gttaagacaaccctcccgcccgacgcgttcacggcagtcatctag
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