Schizophyllum commune: SCHCO_02629417
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Entry
SCHCO_02629417 CDS
T01331
Symbol
SCHCODRAFT_02629417
Name
(RefSeq) cleavage and polyadenylation specificity factor, 25 kDa subunit
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
scm
Schizophyllum commune
Pathway
scm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SCHCO_02629417 (SCHCODRAFT_02629417)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scm03019
]
SCHCO_02629417 (SCHCODRAFT_02629417)
Messenger RNA biogenesis [BR:
scm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
SCHCO_02629417 (SCHCODRAFT_02629417)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
9587421
NCBI-ProteinID:
XP_003031296
UniProt:
D8Q7C3
LinkDB
All DBs
Position
Unknown
AA seq
204 aa
AA seq
DB search
MSNTIALYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGVLVVHDHGHP
HILMLQIANAFFKLPGDYLKPGEDEVDGLKRRLDERLAPPNASSQFNQAHGAENDWEIGD
CLAQWWRPNFETFMYPFVPAHITKPKECKKLFLVQMPEKKVLAVPKNMKLLAIPLFELYD
NAARYGPQLSAIPHLLSRYNFIYQ
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacacaatagctttgtacccgctgtccaacttcaccttcagcacgaaagaggcg
cagcccgaagaggatccgtccgtctccgcacgtctgcagcggctgcagaacaactatgaa
gactttggcatgcgcaggacagtcgagggggtccttgtcgtccacgatcacggtcatccc
catatcctgatgctccagatcgcaaatgcgttcttcaagctccccggagactacctgaaa
cccggggaggatgaagtcgacgggctcaagcggcgcctggatgagcgcctcgctccaccg
aacgcctcaagtcagttcaatcaggcgcatggcgcggagaatgattgggagatcggggac
tgcctcgcgcagtggtggaggcccaatttcgagaccttcatgtaccccttcgtccccgca
cacatcaccaaacctaaagagtgcaagaaactgttcctggtccagatgcccgagaagaag
gtcctcgccgtcccaaagaatatgaagctactcgccattcccctgttcgagctttacgac
aatgctgccagatacggtccgcaattgtctgctatcccgcacttgctgtctaggtacaac
ttcatctaccaatga
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