Schizophyllum commune: SCHCO_02630612
Help
Entry
SCHCO_02630612 CDS
T01331
Symbol
SCHCODRAFT_02630612
Name
(RefSeq) histone deacetylase
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
scm
Schizophyllum commune
Pathway
scm03082
ATP-dependent chromatin remodeling
scm03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
SCHCO_02630612 (SCHCODRAFT_02630612)
03083 Polycomb repressive complex
SCHCO_02630612 (SCHCODRAFT_02630612)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scm03036
]
SCHCO_02630612 (SCHCODRAFT_02630612)
Enzymes [BR:
scm01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
SCHCO_02630612 (SCHCODRAFT_02630612)
Chromosome and associated proteins [BR:
scm03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
SCHCO_02630612 (SCHCODRAFT_02630612)
HDAC complexes
Sin3A-HDAC complex
SCHCO_02630612 (SCHCODRAFT_02630612)
BRAF-HDAC complex
SCHCO_02630612 (SCHCODRAFT_02630612)
REST complex
SCHCO_02630612 (SCHCODRAFT_02630612)
SHIP complex
SCHCO_02630612 (SCHCODRAFT_02630612)
MiDAC complex
SCHCO_02630612 (SCHCODRAFT_02630612)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
SCHCO_02630612 (SCHCODRAFT_02630612)
Heterochromatin formation proteins
Other heterochromatin formation proteins
SCHCO_02630612 (SCHCODRAFT_02630612)
Chromatin remodeling factors
NuRD complex
SCHCO_02630612 (SCHCODRAFT_02630612)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
FAM60A
Motif
Other DBs
NCBI-GeneID:
9592477
NCBI-ProteinID:
XP_003030302
UniProt:
D8QAG8
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MSKRRVTYYYDPDVGAYTYGLGHPMKPHRIRVAHELISAYGMLDKMHVLKAKRATPERMT
AFHTDEYVDFLNKVSPETVRELTYNGSRFLVGDDNPAFEGVFEYCQTSAGGSIAAANRIA
SGATDIAINWAGGLHHAKKREASGFCYINDIVLGIIELLRTYPRVLYVDIDCHHGDGVEE
AFYTTDRVMTCSFHKYGEYFPGTGTQEDTGVGRGTGYAVNVPFKDGLTDESLASVFEPII
DKILEVFQPSAVVLQCGSDSLSGDKLGCFNLTMQGHAHCVQFLRSKNIPLILLGGGGYTV
KNVGRTWAYETACALGIEDTIDPNLPWNEYFEWFGPRYRLEVVASNMEDLNVKEGSLETV
KNIALKNLNAIKGPPSVQMQDVPRQPLGDHLKTKRTEDEEDDERDNLDRRLAQHARYVYD
LQQSSMASSSQSDSSYDSDDSEQPISTSVHRRAAAQKTKQRMSIRTNRYFDVPAEPEYAH
YDCGALPGNKAKRRFFRMGSRMEDDMGMGERMRPNGTVKLFDVHSTMTNGGRTPEREWDR
HEDEDESDMDVDGP
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagagacgggtgacctactactacgatcccgatgttggggcatacacgtacggc
ctgggccaccctatgaagccccacaggatacgggtcgcgcacgagctgatatctgcgtat
gggatgctggataagatgcatgtgctgaaagcgaagcgcgccactcccgaacggatgacc
gcgttccataccgacgaatacgtcgacttcctcaacaaggtgtcgccagagacagtgcgg
gagctcacgtataacgggtctagattccttgtcggtgacgacaaccccgccttcgagggc
gtcttcgagtactgccagacatcagcggggggctcaatagccgccgcgaaccgcatcgcg
tccggcgcgaccgacatcgcgatcaactgggccggcggcctgcaccacgccaagaagcgc
gaggcgtccggcttctgctacatcaacgacatcgtcctcggaatcatcgagctcctgcgc
acctacccacgcgtcctctacgtcgacatcgactgccaccacggagatggcgtcgaggag
gcgttctacacgacggatcgcgtcatgacgtgcagcttccacaagtatggggagtacttt
ccggggacgggcacgcaggaggacacgggtgtggggcgggggacgggctacgcggtgaat
gtgccgttcaaggacgggttgacggacgagtcgctggcgagcgtgttcgagccgatcatc
gacaagatcctcgaagtcttccagccgtccgcagtggtcctgcaatgcggttccgactcc
ctttctggcgacaagctcggttgcttcaacctcaccatgcagggtcacgcgcactgcgtg
cagttcctccgctcgaagaacatccccctcatccttctcggcggcggcggttacaccgtg
aagaatgtcggtcgaacatgggcctacgagactgcctgcgcgctgggtatcgaggacacc
atcgacccgaacttgccatggaacgagtacttcgagtggttcgggccgcggtaccggttg
gaggtagtggcgagcaatatggaggacctgaatgtcaaggaggggtcgctggagaccgtc
aagaatatcgcgctgaagaacttgaatgccatcaaggggccaccgtcggttcaaatgcag
gacgtgccgcggcaacctttgggagaccacctaaagaccaaacgaactgaagacgaagaa
gacgacgagcgggacaacctggacaggaggctagcgcaacacgcccgctacgtctacgac
ctccagcagtcctccatggcatcctcctcccaatccgactcctcctacgactcagacgac
tccgagcagccgatctcaacctccgtccaccgccgcgccgccgcgcagaagaccaagcag
cgcatgtccatccgcacgaaccgttactttgacgtgcccgccgagcccgaatatgcgcac
tacgattgcggcgcgttgccggggaacaaagccaagcggcggttcttccggatgggctcg
cggatggaggacgacatggggatgggggagcggatgcggccgaacgggacggtgaagctg
tttgatgtgcattcgacgatgacgaacggggggaggacgccggaacgggagtgggatagg
catgaggacgaggatgagtcggatatggatgtggatgggccgtag
DBGET
integrated database retrieval system
