Schizophyllum commune: SCHCO_02634738
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Entry
SCHCO_02634738 CDS
T01331
Symbol
SCHCODRAFT_02634738
Name
(RefSeq) Sm-like ribonucleoprotein
KO
K11088
small nuclear ribonucleoprotein D3
Organism
scm
Schizophyllum commune
Pathway
scm03040
Spliceosome
scm04139
Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SCHCO_02634738 (SCHCODRAFT_02634738)
09140 Cellular Processes
09141 Transport and catabolism
04139 Mitophagy - yeast
SCHCO_02634738 (SCHCODRAFT_02634738)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scm03019
]
SCHCO_02634738 (SCHCODRAFT_02634738)
03041 Spliceosome [BR:
scm03041
]
SCHCO_02634738 (SCHCODRAFT_02634738)
03032 DNA replication proteins [BR:
scm03032
]
SCHCO_02634738 (SCHCODRAFT_02634738)
Messenger RNA biogenesis [BR:
scm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
SCHCO_02634738 (SCHCODRAFT_02634738)
Spliceosome [BR:
scm03041
]
Complex A
U1 snRNP components
Sm proteins
SCHCO_02634738 (SCHCODRAFT_02634738)
U2 snRNP components
SCHCO_02634738 (SCHCODRAFT_02634738)
Complex B
U1 snRNP components
SCHCO_02634738 (SCHCODRAFT_02634738)
U4/U6.U5 tri-snRNP components
SCHCO_02634738 (SCHCODRAFT_02634738)
Complex C
U2 snRNP components
SCHCO_02634738 (SCHCODRAFT_02634738)
DNA replication proteins [BR:
scm03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
SCHCO_02634738 (SCHCODRAFT_02634738)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
Motif
Other DBs
NCBI-GeneID:
9591220
NCBI-ProteinID:
XP_050198862
LinkDB
All DBs
Position
Unknown
AA seq
127 aa
AA seq
DB search
MASGLGVPVKLLHESLGHIITVELKTGQLYRGKLAEAEDNLNISLKEITVTGRDGRVSQL
DQVYIRGSMIRFFIVPDMLQNAPMFKRVGPNAMKGRGIGTARGRATIMRANARRGRGVAP
TPRGIRR
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atggcctccggtctcggcgttcccgtcaagcttcttcatgaatccctcggccatatcatc
accgttgagctcaagaccggccagctctaccgcgggaagctcgcagaggcggaagacaac
ctgaacatctcgttgaaagagatcaccgtcactggacgcgatgggcgcgtatcccagctc
gaccaggtctacatccgcgggagcatgatccgctttttcatcgtccccgacatgctgcaa
aacgcgccgatgttcaagcgcgtcggcccaaatgcgatgaagggacggggtattgggacg
gcgagaggtcgtgccacgatcatgcgcgcaaatgctcgccgcggtcgtggagtcgcgccg
acgccgcgcggcatcaggcgatag
DBGET
integrated database retrieval system