Schizophyllum commune: SCHCO_02636577
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Entry
SCHCO_02636577 CDS
T01331
Symbol
SCHCODRAFT_02636577
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
scm
Schizophyllum commune
Pathway
scm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SCHCO_02636577 (SCHCODRAFT_02636577)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scm03400
]
SCHCO_02636577 (SCHCODRAFT_02636577)
DNA repair and recombination proteins [BR:
scm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SCHCO_02636577 (SCHCODRAFT_02636577)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_27
Motif
Other DBs
NCBI-GeneID:
9596919
NCBI-ProteinID:
XP_050198463
LinkDB
All DBs
Position
Unknown
AA seq
1219 aa
AA seq
DB search
MAPKAKEADGKQKTLLNFFTKGDAKAKSTPSKPAFKPKARQSEDAPTEVPRTPKSKRPSM
KELSSSGPATSSTSSPLGTSSVHDTPPTSDPADIDMDDEEEVQLRVRKSSKSKRKVIADE
SDEETEVSEKAASKRPRLSEPLSEEDEDETEAKVSFTKRLSRFKKSPKKRGTRSAASSDD
DEFTLPSEPEDDEAGPETSSAASSAGDFTEDDDDEEPAPKKKAKAKPPAPALASSSSGSG
AGFLTAAERREQGKKNDKKAAEDPYSFLQDIRDKDGKRPGEKGYDPRTIYIPKNAWKEFT
PFERQFWEIKQNHYDTVLFFQKGKFYELYEDDARIGHQEFDLKITSRVKMSMVGVPEMSF
DFWAAKFLGKGYKVGRVDQSETALGAEMRLAADKKGKAKSSEDKAKDKIVQRELNKVYTN
GTLVDPEMLTDEQAGHCVAIIEDNDRGDQSTFGICVLDCATSQFNMSHFTDDVCHTKLET
MMRQLRPKEILVKKSGPGALSVTSTRLLKNILPSQCTWTNLRDVEGFTYPDTIEELRKLY
PDQDDAMDDGGLPETVPQSIRDVAHSQQAMEALGSMIWYLRQLNIDKDILSMKNFNVYDP
MKRGEGLVLDGQTLAHLEVLMNNEGTDEGSLLKLLSRCITPFGKRLFRIWLCMPLREISS
IDDRLDAVEDILNHPSFESQFADVAKGLPDLERIVARIHAKSCKIKDFLKVLSSFKKLSR
GMNALADTAAEFESKTISGLLRGAPDVVPNIKQIEEMFERPASEKEAEELVPMEGKDAVY
DEVIAEIKALEKSLNRQLKKYEDVVGGDLSYWHSATGNKDIYLVETKASQKNIPRDWTKH
GGTKAKTRYVVPALQPEIRKLKEARENRKTAIATFKSRLYAEFDVDRPLWLKIIRVFAEL
DCLFSLAKSSAAIGEPSCRPEFVESESSFMDFQELRHPTLSLQKVEEFIPNDIRLGGEVG
KIALLTGPNMAGKSTCMRMTATGVIMAQLGMRVPATSARLTPVDSILTRMGAYDNMFSNA
STFKVELDECCKILRDATPRSLVILDELGRGTSTYDGMAIAGAVLHELATHTLPLTFFAT
HYGTLTDDFAYHPSIRNMHMSTLVDDEKKEIVFLFKLVEGVATSSFGTHVANLAGVPIEV
VNRADVVSKAFAQQFQQRLQDKKSKDVAARLSHYAQADFVYLYRLATGQAELPEDGERRR
EVLRRLKAVARSYVKQLEQ
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggcacccaaagcgaaagaggccgacgggaagcagaagacgctcctaaacttcttcacc
aaaggcgatgcgaaggcgaagtcaacaccctcgaaaccggcgttcaagccaaaggcgcgt
caatcagaggacgcgcccacagaagtaccgcgtacacccaagtcgaagcggccttctatg
aaggagctatcttcgtctggtcctgcgacgagctcgacgtcttctcctctgggtaccagc
agcgttcatgacacgccgccgactagtgatccggccgacatcgacatggacgatgaggag
gaggttcagctgcgcgttaggaaatctagcaagagcaagcgaaaagtgattgcagacgaa
tcagacgaagagacggaggtctcggagaaagccgcgtccaagcgccccaggctgtctgag
ccactttcagaggaagacgaagacgagacggaggcgaaggtgtccttcaccaagcggctg
agtcgcttcaagaagtccccaaagaaacgcggcacccggtcagctgcgtcctcagacgac
gatgagtttaccctcccctctgagcctgaggatgatgaggccggaccggaaacctcatcc
gcggcttctagcgctggcgatttcaccgaagacgatgacgacgaggaaccagcgccaaag
aagaaggccaaggcgaagccccctgcgcccgcgttggcatcctcgtcgtcgggctcgggc
gctggcttcctcaccgctgccgagcgtcgcgagcaggggaagaagaacgacaagaaggcg
gctgaagatccgtactcgttcttgcaggacatccgtgataaagacggaaaacggcctggc
gagaaggggtacgacccgcgaaccatctacatacccaagaacgcgtggaaagagtttacg
cccttcgagaggcagttctgggagatcaaacaaaatcactatgataccgtgctgttcttc
cagaaggggaaattctatgagttgtacgaggatgatgctcgaattggccaccaggagttc
gatctgaagatcacttcgcgagttaagatgtctatggtcggcgtaccggagatgagcttt
gacttctgggctgccaaattcttgggcaagggctataaggtcgggcgcgtcgaccagtct
gagactgctctgggcgccgagatgcgtctcgcggccgacaagaagggcaaggccaagtcc
agcgaggataaggcgaaggataagattgtgcagcgcgaactgaacaaggtctacacgaac
ggcacgctagtcgatccggagatgctcacggacgagcaagcggggcactgcgtcgcgatt
attgaggacaatgaccgtggcgaccagtcgacgttcggtatttgcgtcctcgactgcgcg
acctcgcagttcaacatgagccatttcaccgacgatgtctgtcatacgaagctggaaacg
atgatgcggcagctgcgcccaaaggaaattttggtgaagaaatcgggccctggcgcactg
tccgtgacgagtacgcgcctgctgaagaatatcctgccttcgcaatgcacgtggacgaac
ctgcgcgacgtcgagggatttacgtatccggacaccatcgaggagctgcgcaagctgtac
ccggaccaggacgatgcgatggacgacgggggattgccggagacggtcccgcaatctatc
cgggacgtagcacattcgcaacaggcgatggaggcgctggggtcgatgatttggtacctg
cgccagctgaacatcgacaaggatatcttgagcatgaagaacttcaacgtgtacgacccg
atgaagcgtggagaggggcttgtgctggatgggcagaccctagcgcatctcgaggtcttg
atgaataatgagggcacggatgagggctcgctgctcaagttgctcagcaggtgtattacg
cctttcggcaaacgcctcttccgcatctggctctgcatgccgctgcgtgagatctccagc
atcgacgatcgtttggacgccgtcgaggatatcctcaaccatccatctttcgagagccag
tttgccgatgtggcgaagggactgccggaccttgagcgcattgtcgcgcgcatacatgcg
aagagctgcaagatcaaggactttttgaaggtcttgagttcgttcaagaagctcagcagg
ggcatgaacgccttggctgacacggcggccgagttcgagtcgaagacgatctctggtctc
ctgcgaggcgcgcccgatgtggtacctaatatcaagcaaatcgaggagatgttcgaacgg
ccagcgtcggagaaggaagcggaagagcttgtgccgatggaggggaaggatgcggtgtat
gatgaggttattgcggagatcaaagcgctggagaagtcgctgaataggcagctgaagaag
tatgaggatgtggtgggaggtgacttgtcctattggcatagtgcgacggggaacaaggat
atctatctcgtcgagacgaaggccagccagaaaaatatccctcgagactggacgaagcac
ggcgggacgaaagccaaaacccgctatgttgtccccgccctccagcccgagatccgcaag
ctcaaggaggcgcgggagaaccgcaaaaccgccatcgcgaccttcaagtcgcgcctctac
gccgagttcgacgttgatcggccgctgtggctcaaaattatccgcgtgttcgccgagctc
gactgcctgttcagcctggcgaagtcgtcggcggccataggggagccgtcgtgccgaccg
gagttcgtcgagagcgagagctcctttatggacttccaggagctgcggcacccgacgctg
tcgctgcagaaggtggaggagttcatcccgaatgatatcaggctgggcggggaggtgggc
aagattgcgctgttgacggggccgaatatggcggggaagagtacgtgcatgcggatgacg
gcaacgggcgtgatcatggcacagctggggatgcgggtgccggcgacaagcgcgaggttg
acgccggtggactcgattctgacgcggatgggcgcatacgataacatgttctcgaacgca
agtacgttcaaggtcgagttggatgagtgctgcaagatcctgcgcgatgcgacgccgagg
tcgctggtcattctcgacgaacttggtcgaggtacttcgacgtacgatgggatggcgatt
gcgggcgctgtgctacatgagctggcgacgcatacgctaccgttgactttcttcgcgacg
cactacggcacgttgacggacgactttgcgtaccatccgagcattcggaacatgcacatg
tcgacgctcgtggacgacgagaagaaggagatcgtcttcctcttcaagctcgtggagggc
gtcgcgacctcctccttcggcacgcacgtcgccaacctggccggcgtgcccatcgaggtc
gtcaaccgcgcagacgtcgtgtccaaggccttcgcgcagcagttccagcagcggctgcag
gacaagaagagcaaggacgtcgccgcgcggctgtcgcactatgcgcaggcggatttcgtg
tatctgtacaggctggcgacagggcaggcggagctgccggaggatggggagcggaggcgg
gaggtgctgaggcggttgaaggcggtggcgaggtcgtatgtgaagcagttggagcagtag
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