Schizophyllum commune: SCHCO_02637845
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Entry
SCHCO_02637845 CDS
T01331
Symbol
SCHCODRAFT_02637845
Name
(RefSeq) polysaccharide lyase family 4 protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
scm
Schizophyllum commune
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
SCHCO_02637845 (SCHCODRAFT_02637845)
Enzymes [BR:
scm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
SCHCO_02637845 (SCHCODRAFT_02637845)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
9590803
NCBI-ProteinID:
XP_050198639
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MVGLSFIGFALAALPFVRAGFGLTESGSSFIVDTDAGLVFTVDSSSGDLTSIVFNDVETQ
DSSKHSQIASGIGASCTWSQGGHDNNYITIPCTASGIVHYYVAKYNDPSIHMATYTSSEP
SVGELRFIARLKKSALPNGVAASDIAGGTAIEGSDVFTVNGETRSKFYSSRQFIDDQVHG
VTGSGIGAYMVVPGTGFEGSSGGPFFRDIDNQGGDQQELYFYMNSGHTQTESYRMGLHGP
YAITYTTGSAPSGDIDTSFYDDLDIQGYVPESQRGRVTGKASGFNSDWSSYISIGWSNSD
AQYWVRTSSDGSYTSPYMKPGTYTMTLYEFELAIASQSVTISAGNVGSSNIASTIDRPDV
IWQIGDYDGTPRGFLNADKIETMHPSDSRMGNWAVSSFTVGNDASGFPMAIFKDVGAATV
TFTLSSGQGGARTLEIATTLAFAGGRPQVTINNWTSDNPAAPSQPDSRGVTRGTWRGNNI
LYSYSVPDGTLLTDGSTNKLTINVISGSSGDQYLSPNFVVDMVRLY
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggttggtctttcctttatcggtttcgcgctcgctgcgcttccgtttgtgcgcgcgggt
tttggcctcacagagagtggaagcagcttcatcgttgacaccgatgctggcttggtcttt
acggttgacagttcatccggcgacctcacctctatcgttttcaacgatgtggagacccaa
gactccagcaagcacagtcaaattgcgtctgggattggcgctagttgcacttggagccaa
ggcggccacgacaacaactacatcacgattccttgcacggcatcgggaatcgttcactat
tacgtggccaagtacaatgaccctagcatccatatggcaacctacacctcttctgagccc
tcagtcggcgagctgcgcttcattgcccggctcaagaagtcggcgcttcccaatggggtt
gcagcctcggatatcgcaggcggcaccgccatcgaaggctccgacgtcttcaccgtcaac
ggcgagacacgctccaagttctactcctcgcgtcagttcatcgacgatcaagtgcacggc
gtcactggctccggaatcggcgcgtacatggtcgtgcccggcacgggcttcgagggatcg
tctggcggaccgttctttagggacatcgacaaccagggcggggatcagcaggagctatac
ttttatatgaactccggccacacccagaccgagtcgtacaggatgggattgcacggccct
tacgcgattacatacacgacgggttcagcgccctctggcgacatcgacacttcgttctac
gacgaccttgacatccaaggttacgtgcccgagagtcaacgcggtcgcgtgacaggcaaa
gccagcggcttcaactctgactggtcctcgtacatcagcattgggtggtccaacagcgat
gcgcagtactgggtgcgcacaagctcggacggctcatacacgagcccgtacatgaagccc
gggacgtatacgatgacgctgtacgagttcgagctggcgatcgcctcccagtcggtgacc
atctcggctggcaatgttgggtcctcgaatatcgcgtccaccatcgatcgtccggatgtc
atctggcaaattggcgactacgacgggacgccgcgagggttcttgaatgcagacaagatt
gagacgatgcacccgagcgatagccgtatgggcaactgggcagtgtcgtctttcaccgtt
ggcaacgacgcctccgggttccccatggcgatcttcaaggacgtcggagcagcgaccgtc
accttcacgctctcctctggccagggtggcgcccgcacgctcgagatcgcgacgacgctc
gccttcgccggcggtcgtccccaggtcaccatcaacaactggacaagcgataacccggct
gcaccgtcgcagcctgattctcgtggcgtgacgcgcgggacgtggcgcggtaataacatc
ctgtactcctacagcgtaccggacggtactctgctcacggacggctcgacgaataagctg
accatcaatgttatctcgggttcgtcgggcgatcagtatttgtcaccgaacttcgtcgta
gacatggttcgcctctactga
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