KEGG   Schizophyllum commune: SCHCO_02640643
Entry
SCHCO_02640643    CDS       T01331                                 
Symbol
SCHCODRAFT_02640643
Name
(RefSeq) Coatomer, alpha subunit
  KO
K05236  coatomer subunit alpha
Organism
scm  Schizophyllum commune
Brite
KEGG Orthology (KO) [BR:scm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:scm04131]
    SCHCO_02640643 (SCHCODRAFT_02640643)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:scm04147]
    SCHCO_02640643 (SCHCODRAFT_02640643)
Membrane trafficking [BR:scm04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    SCHCO_02640643 (SCHCODRAFT_02640643)
Exosome [BR:scm04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   SCHCO_02640643 (SCHCODRAFT_02640643)
  Exosomal proteins of bladder cancer cells
   SCHCO_02640643 (SCHCODRAFT_02640643)
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WDR55 TPR_COPA_B Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 WD40_Gbeta EIF3I Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_Aladin WD40_RFWD3 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_DCAF12 Beta-prop_HPS5 DUF5074 LisH_PAC1 TPR_ZFYVE26
Other DBs
NCBI-GeneID: 9597946
NCBI-ProteinID: XP_003027527
UniProt: D8QH78
LinkDB
Position
Unknown
AA seq 1227 aa
MSVMLTKFESKSNRVKGLAFHPTQPLLAAALHNGSVQLWNYRMGVLVDRFEEHEGPVRGV
AFHPSRPLLVTGGDDYKVRVWDIRPQNRRCLFTLHGHLDYVRTVQFHHEMPWIISTGDDQ
TIRIWNSTSRNCIAILTGHSHYIMSAFFHPKDDLVVSASMDQTVRVWDISGLRKGAPNST
PGGGMGGPGGPGGGGGGASGAGGFEAFDSFSTVKYVLEGHDRGVNFASFHPTLPLIVSAA
DDRVIKIWRMSETKAWEVDSCRGHFNNVSCAIFHPKHELILSCGEDKTIRVWDLAKRTAI
QTFRREHDRFWVLAAHPNLNLFAAGHDSGLIVFKLERERPAFSVYQDTLYYVRDKYVRSY
DFNTGADAGLLSVWKLGSPYMPPRTLSFNPAEKAVIITASSDNGLYELSSLPTQAAGDVK
DSTVDGKRGNGQSAIFVARNRFAVLNTATQIIEVRDLSNSVVKTIKPPVQTNEIFYGGTA
SLILSSTSTVVLYDIQQQKTLAEINSPPVKYVIWSIDGSMVALMSKHTITIANKNFSQHS
LIHETIRIKSGAWDDSGVFIYSTLNHIKYCLWNGDHGVICTLDNPVYLTRIKGKTAHCLD
RSARPRTITFDPTEYRFKLALLKHNYEEMLYIIRTSTLLGQSIIAYLQQKGFPEIALHFV
QDTNTRFELAIECGNLDVAMETAREIDRADCWERLAQQALKQGNHKIVEKCYQQTKNFDK
LSFLYLATGSTEKLSKMQKIADARGNPMSRFHNALYANDVEARIAVLRDVGLYPLAYLTA
KSNGLEDLAQEIRVDAGLEEADVEDVEVTQSTLQPPPIVTETANLNWPTVAQGENFFERA
LVNGQLEAGAEPSYANGDASGAALNSALDAWAKDEEEEEIAEPDNDAWDLDAEEPEAEEE
EAEAEEAAQDQDLGAGATPGASETEYWVRNSPLAADHVSAGSFDTAMQALNRQLGVVNFA
PLKPLFLATYRAAHTYLTPVASLPPLQLHVRRNPHESAPSKVLPVAAKSLQAVRAELTEG
YRCFSLAKFTEARDTFRRVLQSLLLVVLSSDAEAKLWRETVTSAREYLLGVSIELERRRV
EKEEPENVRRDLELAAYLTHCQLLPPHMQIALRSAIGRFSKVNNQADAAKFARRLLELKP
DPKIVAQARQKIAAGDRNPRNAVEVTYDEFTSFEICAASYTPIYKGTAAVHCPYTDAAYL
PQYKGQLDPLTELTEIGATATGLPAPW
NT seq 3684 nt   +upstreamnt  +downstreamnt
atgtcggtgatgctcacgaaattcgaatcgaagagcaaccgcgtcaaggggctcgctttc
caccccacacaaccactgcttgcggcggcgctgcacaatgggagcgtgcagctttggaac
tacaggatgggcgtgcttgtcgaccggtttgaggagcatgaaggtcccgtccgtggtgtc
gctttccatccttcgcgccccttgttagtgactggaggtgatgactacaaagttcgcgtg
tgggatatccgcccgcagaaccgccgctgcctctttaccctgcacggccatctcgactac
gtccgtaccgttcagtttcaccatgagatgccctggattatctcgacaggcgacgaccag
acgatcaggatatggaacagcacctcgcgcaactgcatcgcgatcctcaccggccattcc
cactacatcatgtctgcattcttccatcccaaggacgatcttgttgtatccgcgtctatg
gatcaaaccgtccgcgtctgggacatctccggccttcgcaaaggcgcgcccaacagcact
cccggcggcggtatgggtggtcccggcggccctggtggtggtggcggcggtgccagcggc
gcgggcggctttgaggcctttgacagcttctcgaccgtcaagtacgtcctcgaaggccac
gaccgcggcgtcaacttcgcgtccttccaccccacgcttccgctcatcgtttccgctgcc
gatgatcgcgttatcaagatctggcgcatgagcgagacgaaggcatgggaggtcgactct
tgccgcgggcacttcaacaacgtctcctgcgccatcttccaccccaagcatgagctgatc
ctctcttgcggcgaggacaagacgatccgcgtctgggacctcgccaagcgcaccgctata
cagacattccgtcgcgagcacgaccgcttctgggtccttgccgcgcatcccaacctcaac
ctcttcgctgcgggtcacgatagcggcctcattgtattcaagctcgagcgcgagcgtccg
gctttctcggtttaccaggacaccctctactacgtgcgcgacaaatatgtgcgctcgtac
gacttcaacacgggcgcggacgctggtctgctcagcgtctggaagctgggcagcccgtat
atgccgccgcgcaccctcagcttcaacccggcggagaaggcggtgatcatcactgcgtcg
agcgacaatggcttgtacgagctatcaagtttacctacacaggctgcgggcgacgtcaag
gactcgactgtggacggcaagcgtggcaacggccagagcgctatcttcgtcgcacggaac
cggttcgctgtcctcaacacagctacgcagatcatcgaagtccgcgacctgtcgaactcg
gtggtcaagacaatcaagccgcctgtccaaaccaacgagatcttctacggtggcacagcc
agcttgatcttgagctcgacgtcgacagtcgtcctatacgacatccagcaacagaagacg
ctcgctgagatcaacagcccgccggtcaaatatgtcatctggagcatcgatgggtccatg
gtcgctctcatgagcaagcacacgatcaccatcgcgaacaagaacttctcgcagcacagc
ttgattcatgagactattcgtatcaagtccggcgcttgggatgactctggtgtcttcatc
tactcgacactgaaccacatcaagtactgcttatggaatggcgaccacggcgtcatctgc
acccttgacaaccccgtctacctcacccgcatcaagggcaagaccgcccactgcctcgac
cgctccgcccgcccgcgcaccatcaccttcgacccgaccgagtaccgcttcaagctcgct
ctgctcaagcacaactacgaggagatgctgtacatcatccgcacctcgacgctcctcggg
cagagcatcatcgcgtacctgcagcagaagggcttcccggagatcgcgctgcactttgtg
caggacacgaacacgcggttcgagcttgcgatcgagtgcgggaacctggatgtggcgatg
gagacggcgagggaaattgaccgggcggattgctgggagcggttggcgcagcaggcgttg
aagcaggggaaccataagattgtggagaagtgctaccagcagacgaagaactttgacaag
ctgtcgttcttgtatctggcaactggcagcaccgagaagttgtcgaagatgcagaagatc
gccgacgctcggggaaaccccatgtcaaggttccacaacgcgctgtacgccaatgatgtt
gaggcgcggatcgcagtccttcgggatgttggcctctaccctcttgcctaccttactgcg
aagtcgaacggcctcgaagaccttgctcaggagatccgcgtcgatgctggcttggaggag
gctgacgttgaagacgtcgaggtcacgcagtcaaccctccagccgccacctatcgtgaca
gagacggccaacctcaactggccgaccgtcgcccagggcgaaaacttctttgagcgcgca
ttggtcaacggccagcttgaggctggtgccgagccatcgtatgccaacggcgacgcgtcc
ggtgctgctctcaactctgccctcgatgcatgggcgaaggacgaggaagaggaagagatc
gcggaacctgacaacgatgcttgggatctcgacgctgaggagccagaagcggaagaggaa
gaagctgaagccgaggaagcggcacaggatcaggaccttggtgctggtgccacgccagga
gcaagcgagaccgagtactgggtacgcaactcaccgctggctgccgaccacgtctctgcc
ggctccttcgacacggcgatgcaagcacttaaccgccagctcggtgtcgtcaacttcgcg
cctctgaagccattgttccttgccacctaccgcgccgcgcatacctacttgacgcccgtt
gcctcattgccgccgctacagctgcacgtacgacgcaatccgcacgagtcggcgcccagc
aaggtgctgccggtcgcggcgaagtctttgcaggctgtacgcgcggagctgacggagggc
taccgctgcttctcgttggcgaagttcactgaggcgcgggacaccttccggcgcgtgctg
cagtcgttgctgctcgtggtcctttcgtcagacgcggaagcgaagctgtggcgagagacc
gtgacgtccgcacgggagtacctccttggcgtgtctatcgagctcgagcggcggagagtg
gagaaggaggagcctgagaacgtccggcgcgacttagagctggctgcgtacctcacgcac
tgccagctgctgccaccgcacatgcagatcgcgctccggagcgcgatcggccgtttctca
aaagtgaacaaccaggctgatgctgccaagtttgctcgccgcttacttgagctcaagccg
gatccgaaaattgttgcgcaggcgcgccaaaagatcgcagcgggcgaccgcaacccgcgg
aacgcggtcgaggttacttacgacgagttcacgagcttcgagatctgcgccgcgtcgtac
acaccgatttacaagggcacggccgcggtgcactgcccatacaccgacgcagcgtacttg
ccgcagtacaagggccagttggacccgttgacggagctgacggagatcggggcgacggcg
acggggctgccggcgccgtggtag

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