Schizophyllum commune: SCHCO_02640828
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Entry
SCHCO_02640828 CDS
T01331
Symbol
SCHCODRAFT_02640828
Name
(RefSeq) DEAD-domain-containing protein
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
scm
Schizophyllum commune
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scm03009
]
SCHCO_02640828 (SCHCODRAFT_02640828)
Enzymes [BR:
scm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SCHCO_02640828 (SCHCODRAFT_02640828)
Ribosome biogenesis [BR:
scm03009
]
Eukaryotic type
Pre-60S particles
Helicases
SCHCO_02640828 (SCHCODRAFT_02640828)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
PIF1
Motif
Other DBs
NCBI-GeneID:
9596767
NCBI-ProteinID:
XP_050197960
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MGKRKASSKKAEGSRKKTKIVHKNPDDLPWKTVKRPVVAGLDGDDGILELEEVEDVEVVY
EETEGGRVARFNVLRAGGEDEGDFDMKEISGLEEEMEDDEDADQEPSPSELGEAPNFEGL
EEGSSEYHEVTPEGDYEEWVPFTQTGLAVDEEPNALDTPTSLEEWEPYALHPQLLKTLQA
RNFLKPTPIQAAALIPALAGRDVVGVAQTGSGKTLAYGLPILHHLLENPHKSTTGEKRPV
RALILAPTRELALQVSSHLNACLNTVDEAPESRPEAAEVKSDAPSKSAKKGKKGGKGDKN
SDAQTNAKKPPPPVSVAALVGGMSLQKQKRILGRGVDVLVATPGRLWDVIQEDDDLARSI
KNLKFLVLDEADRMIEAGHFAELDNVLRLTLRANKNDQIQTEVGEEVEDEREDDDENIQD
GLQTFVFSATLSKDLQRNLKKRKAPGKSRKPRAAPASTLDDLLMRLDFRDEEPEVIDLSP
KGGVVSTLKESKVECVVSDKDVYLYYFLLRYPGRSLVFLSAIDGIRRLLPLMELLEIKAF
PLHSQLEQRQRLKNLDRFKSTPNCVLLATDIAARGLDIPAVDHVLHYQIPRSADAYIHRN
GRTARANAAGFSMLMCAPDERKVARSLLNSVGRQFDDIPELPVERSLFDKLKARIQLAKQ
IDTAQHRVKKEKHERKWMREAADAMEVELDSDFMSDSESEAPSKRQKKAANSKTAALKAQ
LKELLAQPLVARGVSTKYITSGSRPIVDDLLAGESNESLIGLKKSEARNDLVHTKKKRKQ
PS
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagcgcaaggcttcgtcgaagaaagcagaaggctcgcgcaaaaagacgaagatt
gtccacaaaaacccagatgatctgccctggaagactgtcaagcgcccggtagtcgcgggg
ttggacggcgacgatggtatcctggaactggaggaggtggaggatgtggaggtggtgtac
gaggaaacggaagggggaagagtcgcgcgattcaatgtcctacgcgccgggggcgaagac
gaaggcgacttcgatatgaaggagatcagcgggttagaggaggagatggaggatgatgag
gacgccgatcaggagccgtcaccatcagagttgggcgaagcgcctaacttcgagggactc
gaggagggatcctcggaataccacgaggtgactcctgagggtgattacgaggaatgggtg
ccgttcacccagacaggcttagctgtggacgaagagccgaacgcgctcgatacgcccaca
tcattggaggaatgggaaccttacgcgctgcatccccaactactaaagacactgcaagcg
cgcaacttcctcaaaccgacacccatccaggccgccgccctcatccccgcccttgctggt
cgtgacgtcgtcggtgtcgctcagacaggctccggaaaaaccctcgcgtacggtctcccc
atcctccaccatctcctcgagaacccccacaagtccacgaccggtgagaagcgccccgtc
cgcgccctcattctcgcacctacgcgcgagcttgcactgcaagtgtcctcgcatctgaac
gcgtgtctcaacaccgtcgatgaggcgcctgaaagcaggcccgaggcagctgaagtcaag
tctgacgcgcctagcaagtcggcgaagaaggggaagaagggtggcaagggtgacaagaat
tcggatgcgcagacgaatgccaagaagccgcctcctccggtcagcgttgccgcgctcgtt
ggagggatgtcactgcagaagcagaagcggatcctggggcgcggggtggatgtgttggtg
gcgacgcccgggcggttgtgggatgtcatccaggaggatgacgaccttgcgaggagtatc
aagaacctgaagttcctcgtcctcgacgaggcggaccgcatgatcgaagccggtcatttc
gccgagctcgacaacgtcctccggctaacgcttagggctaacaaaaacgaccaaatccag
accgaagttggcgaggaagtcgaggacgaacgcgaagatgacgacgagaacatccaagac
ggtcttcagaccttcgtcttctcggccaccctcagcaaggatttgcagcgcaacctcaag
aagcgcaaggcccccgggaagagtcgcaagccgcgcgcagcgcctgcttcgacgctagat
gaccttcttatgcgtctggacttccgcgacgaagaaccagaagtgatcgacctgagcccg
aagggcggcgtggtctctacactgaaggagagcaaggttgagtgtgtggtgtcggataag
gatgtgtatctgtattacttcctattgcgctaccctgggcgatcgcttgtcttcctctcc
gccatcgacggtatccggcgtctactaccccttatggaacttctggagatcaaagcgttc
cccctccattcccaactcgagcaaaggcaacgattgaaaaacctggatcggttcaagtcg
acgccgaactgcgtactcctcgcgacggacattgccgcgcgcggactggacatacccgcg
gtcgaccacgtcctacattaccagataccgcgctcggccgacgcgtacatccaccggaac
ggccgcacggcgcgcgccaacgcggcgggcttcagcatgctcatgtgcgcgccggatgag
cgcaaggtggcgcgctcattgctcaacagcgtcgggaggcaatttgacgacatacccgag
ctccctgtggagcgcagcctcttcgacaagctcaaggcgcgcatccagctcgcaaagcag
attgatacggcgcagcaccgcgtgaagaaggagaagcacgagcggaagtggatgcgcgag
gccgcggacgcgatggaggtcgagctcgactcggacttcatgtccgactcggagagcgaa
gcgccgagcaagcgacagaagaaggcggcaaattcgaagacggcagcgctcaaggcgcag
ctcaaagagctgctagctcagccactggtcgctcgtggcgtgtcgacgaagtatatcact
tcggggagtcggcccattgttgacgacttattggcgggagagagcaatgagtcgctcatc
gggctcaagaaatcggaggcgcgcaatgaccttgttcataccaagaagaaaagaaagcag
ccgtcatga
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