Schizophyllum commune: SCHCO_02642247
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Entry
SCHCO_02642247 CDS
T01331
Symbol
SCHCODRAFT_02642247
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K07897
Ras-related protein Rab-7A
Organism
scm
Schizophyllum commune
Pathway
scm04138
Autophagy - yeast
scm04144
Endocytosis
scm04145
Phagosome
scm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
SCHCO_02642247 (SCHCODRAFT_02642247)
04145 Phagosome
SCHCO_02642247 (SCHCODRAFT_02642247)
04138 Autophagy - yeast
SCHCO_02642247 (SCHCODRAFT_02642247)
04148 Efferocytosis
SCHCO_02642247 (SCHCODRAFT_02642247)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scm04131
]
SCHCO_02642247 (SCHCODRAFT_02642247)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scm04147
]
SCHCO_02642247 (SCHCODRAFT_02642247)
04031 GTP-binding proteins [BR:
scm04031
]
SCHCO_02642247 (SCHCODRAFT_02642247)
Membrane trafficking [BR:
scm04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
SCHCO_02642247 (SCHCODRAFT_02642247)
Exosome [BR:
scm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SCHCO_02642247 (SCHCODRAFT_02642247)
Exosomal proteins of other body fluids (saliva and urine)
SCHCO_02642247 (SCHCODRAFT_02642247)
Exosomal proteins of colorectal cancer cells
SCHCO_02642247 (SCHCODRAFT_02642247)
Exosomal proteins of bladder cancer cells
SCHCO_02642247 (SCHCODRAFT_02642247)
GTP-binding proteins [BR:
scm04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
SCHCO_02642247 (SCHCODRAFT_02642247)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
AAA_24
AAA_22
nSTAND3
Motif
Other DBs
NCBI-GeneID:
9588843
NCBI-ProteinID:
XP_003026006
UniProt:
D8QLW8
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MDGISPSFMSASSSTIKLVIIGPSGVGKTSLRGQYISGRFSAGYRATIGADFITKTLPHP
SRPDESVVLQIWDTAGQERFSSLSSAFFRGADAAVLCFDANDRQSMRSLTKWWDEFKQRT
PVADEDLEEYCCVVVGNKTDLVRDGAEGAVGLAEAEAFLEELVPIVARSPAQARANGWHT
PFPNGWHTPPPLHTESPTTYQPPVEFPTKASSPRPASPLAGLSPGRVRSKSISIVAPHRP
SRHSVRASCSPSDRGNASRSRSRSSSRFYTGTMTTTATGMSIYHTPSSSVFDVFHSARAS
PEPSISPSGSYARSRRSTQASASTVTITPSLFAREHDADGVQMQDACAVQDATPELGPRL
FFASAKTGENVPDIFEYVARRVIQRWEREERRMGFGENDNPSVVHLNQVEERGRPGRGVG
ACC
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggatgggatatccccctcgtttatgtctgcctcgtcgagtacaatcaagctcgttatc
atcggaccgtcgggcgtagggaagaccagcttgaggggacagtacatatccggcaggttc
agcgcagggtatcgcgcgaccatcggcgcagacttcatcacaaagacactcccccatccc
tcaaggccggacgagtcggttgttctgcagatatgggacacagccggccaggagcgcttc
tcgtcgctctcctctgcgttcttccggggggcggacgccgcggtgctgtgcttcgatgcg
aacgaccggcagtcaatgcgctcgctgaccaagtggtgggacgagttcaagcaaagaacg
ccagtggcggacgaggacctcgaagagtactgctgcgtggttgtggggaataagacagac
cttgtacgcgacggtgcagaaggggccgtcggccttgcagaagcggaagcttttctcgag
gagctcgtccccattgtcgcacgatcaccagcgcaggccagggcgaatggctggcatacc
ccatttcccaatggatggcatacaccccctccattgcacacagaatcaccaacaacatac
caaccaccagtcgagttccccaccaaagcatcctccccaagacccgcatccccgcttgct
ggcctctcaccaggtcgcgtgcgctccaagtcgatatccatcgtcgccccccatcgtcca
tcgcgacattccgtgcgcgcatcctgctcccccagcgatcgcggcaacgcctcgcgctcg
cgctcccgctcctccagccgcttctacacaggcacaatgaccacgaccgcgacgggcatg
tccatctaccacacaccatcatcatccgtcttcgacgtatttcactccgcgcgcgcgtcg
cccgaaccgtcgatctccccctcgggctcgtacgcgcgctcgaggcggtccacacaggcg
agcgcgagcacggtgactatcacgcccagtttgttcgcgcgcgagcacgatgcggatggg
gtgcagatgcaggatgcatgcgcggtacaggacgccactcccgagctcggcccacgcctc
ttcttcgcgtcagccaagacgggcgagaacgtcccggacatcttcgagtacgtcgcgcgg
cgtgtcatacaaaggtgggagcgcgaggagcggcggatggggttcggcgagaacgacaat
ccgagcgtggtgcacctgaaccaggtggaggagcggggaaggccaggtaggggagtgggc
gcttgctgttga
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