Schizophyllum commune: SCHCO_02642912
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Entry
SCHCO_02642912 CDS
T01331
Symbol
SCHCODRAFT_02642912
Name
(RefSeq) WD40 repeat-like protein
KO
K14298
mRNA export factor
Organism
scm
Schizophyllum commune
Pathway
scm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SCHCO_02642912 (SCHCODRAFT_02642912)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scm03019
]
SCHCO_02642912 (SCHCODRAFT_02642912)
03036 Chromosome and associated proteins [BR:
scm03036
]
SCHCO_02642912 (SCHCODRAFT_02642912)
Messenger RNA biogenesis [BR:
scm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SCHCO_02642912 (SCHCODRAFT_02642912)
Chromosome and associated proteins [BR:
scm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
SCHCO_02642912 (SCHCODRAFT_02642912)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_RFWD3
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_RSE1_2nd
WDR90_beta-prop_4th
Beta-prop_ACSF4
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IFT122_1st
RMC1_N
LEM
Motif
Other DBs
NCBI-GeneID:
9593607
NCBI-ProteinID:
XP_003027117
UniProt:
D8QID3
LinkDB
All DBs
Position
Unknown
AA seq
349 aa
AA seq
DB search
MSFFSTPASSSSAEKDVEMPDPPSDSISSVAFSPQADYLAVGSWDNSVRIYEVGAGGQSQ
GKALYQHQGPVMGVCWNKEGNKVFSGGADNAGRMFDVATGQATQVAQHDMPIKAVRWIDA
PQAGILATASWDKTIKYWDLRSSTPVASVTCPERVYTFDVQFPLMVVGTAERHIQIFNLS
NPSTPYKSIQSPLKWQTRVVSCFTQSANSGFAVGSIEGRVAIQYVEEKDSANNFSFKCHR
RDSQPNSKDQSLVYAVNDISFHPVHGTFSTCGADGTIHFWDKDARTRLKSFDAQPGPITS
TAFNRTGTIFAYAVSYDWSKGHSGNTPGHPNKLMLHACKDEEVKKRPKK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcttctcgacgccggcgtcgtcctcctcggcggaaaaggatgttgagatgccc
gacccgccctcggattctatctcctccgtcgcgttctccccgcaagcggactatcttgca
gtcggtagctgggacaatagcgtgcgcatctatgaagtcggcgcgggcgggcagtcgcag
gggaaggcgctctaccagcaccagggacccgtgatgggcgtgtgctggaacaaggagggg
aacaaggtgttctcgggcggcgcggacaacgcggggcgcatgttcgacgtggcgacgggg
caggcgacgcaggtcgcgcagcacgacatgccgatcaaggccgtgcggtggatagacgcg
ccgcaggcggggatcctcgcgacggcgagctgggacaagacgatcaagtactgggacttg
cggtcgtcgacgccggtggcgagtgtgacgtgcccggagagggtgtacacgtttgatgtg
cagttcccgctcatggtcgtcggtacggcggagcgccacatccagatattcaaccttagc
aatcccagcacgccgtataagtcgatacaatccccgttgaagtggcaaacacgcgtcgtg
tcgtgcttcacacagtctgcaaacagtggcttcgcggtaggcagcatcgaaggacgcgtc
gccatccaatacgtcgaagaaaaggactctgccaacaacttctccttcaaatgccaccgc
agagacagccaacccaactccaaggaccagtcgctcgtctacgccgtcaacgacatctcc
ttccacccagtgcatggaaccttctcgacatgcggcgccgacgggaccatccacttctgg
gataaagatgcacgcacgcgcctgaaatcgttcgatgcccagccgggtccgatcacgagt
acagcgttcaaccggacggggacgatcttcgcgtacgcggtgtcctacgactggtcgaag
ggccactcggggaacacgcccgggcacccgaacaagctcatgctgcacgcgtgcaaagac
gaggaggtcaagaagaggcccaagaagtag
DBGET
integrated database retrieval system