KEGG   Schizophyllum commune: SCHCO_02642912
Entry
SCHCO_02642912    CDS       T01331                                 
Symbol
SCHCODRAFT_02642912
Name
(RefSeq) WD40 repeat-like protein
  KO
K14298  mRNA export factor
Organism
scm  Schizophyllum commune
Pathway
scm03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:scm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    SCHCO_02642912 (SCHCODRAFT_02642912)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scm03019]
    SCHCO_02642912 (SCHCODRAFT_02642912)
   03036 Chromosome and associated proteins [BR:scm03036]
    SCHCO_02642912 (SCHCODRAFT_02642912)
Messenger RNA biogenesis [BR:scm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     SCHCO_02642912 (SCHCODRAFT_02642912)
Chromosome and associated proteins [BR:scm03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    SCHCO_02642912 (SCHCODRAFT_02642912)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_EML_2 WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_HPS5 WD40_MABP1-WDR62_2nd Beta-prop_EML WD40_RFWD3 Beta-prop_Aladin Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_RSE1_2nd WDR90_beta-prop_4th Beta-prop_ACSF4 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_IFT122_1st RMC1_N LEM
Other DBs
NCBI-GeneID: 9593607
NCBI-ProteinID: XP_003027117
UniProt: D8QID3
LinkDB
Position
Unknown
AA seq 349 aa
MSFFSTPASSSSAEKDVEMPDPPSDSISSVAFSPQADYLAVGSWDNSVRIYEVGAGGQSQ
GKALYQHQGPVMGVCWNKEGNKVFSGGADNAGRMFDVATGQATQVAQHDMPIKAVRWIDA
PQAGILATASWDKTIKYWDLRSSTPVASVTCPERVYTFDVQFPLMVVGTAERHIQIFNLS
NPSTPYKSIQSPLKWQTRVVSCFTQSANSGFAVGSIEGRVAIQYVEEKDSANNFSFKCHR
RDSQPNSKDQSLVYAVNDISFHPVHGTFSTCGADGTIHFWDKDARTRLKSFDAQPGPITS
TAFNRTGTIFAYAVSYDWSKGHSGNTPGHPNKLMLHACKDEEVKKRPKK
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgtctttcttctcgacgccggcgtcgtcctcctcggcggaaaaggatgttgagatgccc
gacccgccctcggattctatctcctccgtcgcgttctccccgcaagcggactatcttgca
gtcggtagctgggacaatagcgtgcgcatctatgaagtcggcgcgggcgggcagtcgcag
gggaaggcgctctaccagcaccagggacccgtgatgggcgtgtgctggaacaaggagggg
aacaaggtgttctcgggcggcgcggacaacgcggggcgcatgttcgacgtggcgacgggg
caggcgacgcaggtcgcgcagcacgacatgccgatcaaggccgtgcggtggatagacgcg
ccgcaggcggggatcctcgcgacggcgagctgggacaagacgatcaagtactgggacttg
cggtcgtcgacgccggtggcgagtgtgacgtgcccggagagggtgtacacgtttgatgtg
cagttcccgctcatggtcgtcggtacggcggagcgccacatccagatattcaaccttagc
aatcccagcacgccgtataagtcgatacaatccccgttgaagtggcaaacacgcgtcgtg
tcgtgcttcacacagtctgcaaacagtggcttcgcggtaggcagcatcgaaggacgcgtc
gccatccaatacgtcgaagaaaaggactctgccaacaacttctccttcaaatgccaccgc
agagacagccaacccaactccaaggaccagtcgctcgtctacgccgtcaacgacatctcc
ttccacccagtgcatggaaccttctcgacatgcggcgccgacgggaccatccacttctgg
gataaagatgcacgcacgcgcctgaaatcgttcgatgcccagccgggtccgatcacgagt
acagcgttcaaccggacggggacgatcttcgcgtacgcggtgtcctacgactggtcgaag
ggccactcggggaacacgcccgggcacccgaacaagctcatgctgcacgcgtgcaaagac
gaggaggtcaagaagaggcccaagaagtag

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