Schizophyllum commune: SCHCO_02642933
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Entry
SCHCO_02642933 CDS
T01331
Symbol
SCHCODRAFT_02642933
Name
(RefSeq) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
scm
Schizophyllum commune
Pathway
scm00040
Pentose and glucuronate interconversions
scm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SCHCO_02642933 (SCHCODRAFT_02642933)
Enzymes [BR:
scm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SCHCO_02642933 (SCHCODRAFT_02642933)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
9596689
NCBI-ProteinID:
XP_003027296
UniProt:
D8QIE8
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MYLLVVLLASLLSWTHYAAAQDGYATENGGVTGGSGGTTITVSSAAAFETAIVQDEPTVV
YLSGPLELDDRLNVASNTSIFGIGSDAVITGGGLRIEDASNVIVQNLVINKIVGDDAISI
QESTNVWIDHNEFFSDTDHGFDYYDGLLDITHGCDFITVSYNYFHDHYKCSLIGADPDNA
DEDTGKFHITYHHNYFKNIHTRTPAARFAHVHSYNNLFEDIVSQGIHSRSDAEVLIEGNV
FVNSTEPLSTYGFVIPDDSPEDPEGDYEPDGYANLGADNDWGSGEINLTQTGTFTSVPYA
YTLTPLDEVQAAVQAGAGVGKL
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtacctcctcgtcgtcctcttagcttccttactctcttggacccactatgccgctgcg
caagacgggtacgccaccgagaacggaggtgtcactggcggctctggcggtactactatt
actgtgtcgtcggctgcggccttcgagactgctatcgtgcaagacgagcccaccgtcgta
tacctctcgggacccctcgagctcgacgaccgtctcaatgtcgctagcaacaccagtata
ttcgggataggttcggacgcagtcatcaccggtggtgggcttcgcatcgaggacgcgtca
aatgtcatcgtgcagaacctggtcatcaataagatcgtaggcgacgatgccattagcatc
caagaaagcacgaacgtatggatcgaccacaacgagttcttctcggacacggatcacgga
ttcgactactacgatgggctgctggacataacacacggctgcgacttcatcacggtgtcg
tataactatttccatgatcactacaagtgctccctgatcggcgcagatcctgacaacgct
gacgaagacaccggcaaattccacattacctaccaccacaactacttcaagaacatccat
acgaggacgcccgccgcccgcttcgcccacgtccactcttacaacaaccttttcgaggat
atcgtatcgcaaggaatccactcgcgctcggacgccgaagtgctcatcgagggcaacgtc
tttgtgaactcaaccgaaccgctctcgacatacggattcgtcatcccagacgactcgccg
gaggaccccgagggcgactacgagcctgatgggtacgcgaacttgggcgcagacaatgac
tggggcagcggcgagatcaatctcacgcagacggggaccttcacgagcgtaccgtatgcg
tacacgcttacaccacttgacgaagtgcaggcggcggtgcaggccggggcaggggtaggc
aagttgtaa
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