KEGG   Schizophyllum commune: SCHCO_02645895
Entry
SCHCO_02645895    CDS       T01331                                 
Symbol
SCHCODRAFT_02645895
Name
(RefSeq) transcription initiation Spt4
  KO
K15171  transcription elongation factor SPT4
Organism
scm  Schizophyllum commune
Pathway
scm03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:scm00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    SCHCO_02645895 (SCHCODRAFT_02645895)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scm03021]
    SCHCO_02645895 (SCHCODRAFT_02645895)
   03019 Messenger RNA biogenesis [BR:scm03019]
    SCHCO_02645895 (SCHCODRAFT_02645895)
Transcription machinery [BR:scm03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     SCHCO_02645895 (SCHCODRAFT_02645895)
  RNA polymerase I system
     SCHCO_02645895 (SCHCODRAFT_02645895)
Messenger RNA biogenesis [BR:scm03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     SCHCO_02645895 (SCHCODRAFT_02645895)
SSDB
Motif
Pfam: Spt4 Thioredoxin_2 Zn_ribbon_NOB1
Other DBs
NCBI-GeneID: 9596558
NCBI-ProteinID: XP_003026193
UniProt: D8QLM5
LinkDB
Position
Unknown
AA seq 124 aa
MAELLSGQASIPGPKTTRHLRACMLCSLIQTSADFKRHGCPNCDEVLQLRGSLDRVQMYT
TNQFEGVIAVIDPEQSWVARWQRTAKQVRGMYAVRVKGRIGQEMEETLEARGIKYRPRDG
TDQD
NT seq 375 nt   +upstreamnt  +downstreamnt
atggccgaactcctctccggacaagcctcgatcccggggcccaagacaacgcggcacctg
cgcgcgtgcatgctctgctccctgattcagacgtccgccgacttcaagcggcacgggtgc
ccgaattgtgacgaggtcctacagctgcgaggctcgctggacagggtgcagatgtacacg
acgaaccagtttgagggcgtcatagcggtgatcgaccccgagcagagctgggttgcgcga
tggcagaggacggcgaaacaagtacgcgggatgtatgcggtgcgcgtgaaggggagaata
ggccaagaaatggaggagaccctggaggcgcgggggatcaagtacaggccgagggatggt
acagatcaggactag

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