Schizophyllum commune: SCHCO_02662940
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Entry
SCHCO_02662940 CDS
T01331
Symbol
SCHCODRAFT_02662940
Name
(RefSeq) uncharacterized protein
KO
K18725
nucleoporin POM152
Organism
scm
Schizophyllum commune
Pathway
scm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SCHCO_02662940 (SCHCODRAFT_02662940)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scm03019
]
SCHCO_02662940 (SCHCODRAFT_02662940)
Messenger RNA biogenesis [BR:
scm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SCHCO_02662940 (SCHCODRAFT_02662940)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig-like_POM152
Ig_Pom152
Ig-like_Pom152_1
Ig-like_Pom152_9
Motif
Other DBs
NCBI-GeneID:
9585041
NCBI-ProteinID:
XP_003038744
UniProt:
D8PRD6
LinkDB
All DBs
Position
Unknown
AA seq
1182 aa
AA seq
DB search
MFGGLTLHLGWMGDSSAGAHAGALSDIPATVQAYGVLDYLSPLTFGLIGSSIPGWQDEHL
RGQHTVRMSPISTARLNPEAQAFCLSPPDNYVLIPVLLNNTNTAALRYSLTPLGRTTSAN
PTYHDLSARDIRAIESAREETLQLTRVTKSNKNDDDYDEYDEEEEQDDESSSSGLQKTQS
LIHIKLDKPGTLRIERLLDTSGVMAKVFTSEVTVAPCPRAEFKSLPKDGDVQCAAPDLEM
QMEIDIYGVPPLSMRYSKIVNGRRELFTVEGVEGADSGELPSSQQAATSSLAVTERKFVQ
RVAAPQTIPVPLAAALDTTGTHTYVLEEVTDAVGNYARLGQDSQLKTTSSVTVLRRPAMS
FKRCGPGKPTPVLIGAETSLPVVASVADAMDAPYEVTVKYNPPTDAPRRSSPFTTKYSTN
DSRQDVSVLAKYPGEYTIVGVHGKYCEGDVLAPDVCTVFELPKPSVGVEWEKIHECSGDT
GVRAGLLLHGTPPFQVTYQAQKGRGTPRTHTMTFQSSRDEIIIRPPEEGDYIFSITHISD
AYYKKEEVKAKSMKQTIHPVASAEFAGSGRRKQRMSICEDRTIDVDVHLRGSAPWNIELQ
IISPRGSMIRTYNGIDVSPKRLQIPIPDEVDKAGGHLEIDLVSVQDKSGCKRSLSTQGIS
VDVRRVKPTVKFYGSPSQREITVLERQKTHLPLRLTGDGPWTVKYRRTESPSSVLTARLN
SPNDELEVVEKGTYELMGVNDVMCPGSVVADSSRFKVNWIPRPSAKLAENTPATYEPFNS
SHILQPVCAGDDDFIDLDLSGRPPFQIMYNIAKANSYYGRSDIIDQPTYNSIQTRTRFQL
RTDQPGRMLYEVKQIGDVHYPLEKHRNATIPQRERLLIEQDVLARPSARFKSQEARMSYC
VNDALTAQSIASDDGLVLLEGTPPFTLTLDVGKLGTLEHETVEVTVNEYAWKLSLPEYHF
KSVGTHRVSIQSIADASGCAHVPLDPFQTSLNIDVAEMAAIVLFDKREDLCVGDITQFQL
EGIPPWNIEYRINGRTHTEVAKTSPFALLQQAAGEFAVTSIAHQQQKCKAAVTDLRYRVH
ALPSAEVGHGGAYYDDIREGEQANIVFTFIGEPPFTFTYQRAELGRGGRPGRVLETHTVS
KIVDYDYKITSNQEGVWTVTSITDKYCRYPPAQPDVLDKRRG
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgttcggagggctaactctacacctcggctggatgggagactcaagtgcaggggcacat
gcaggtgcgctatctgacataccggccacggtccaagcctatggtgtcctggattacctg
tcccccctcacgttcggcctgatcggttcgtcgataccaggttggcaggatgagcatctc
agaggacaacacactgtccgaatgtcacccatatccactgcgcgcctaaatcccgaggcg
caggccttctgtctttcgcccccagacaactacgtcctgatcccagtcctcctgaacaac
acaaatacggcggcactgcgatactcattgacaccacttggccgcacgacaagtgcgaat
cctacctaccacgatctgagcgctcgagatatacgcgctatcgagagcgcacgcgaggaa
acactgcagctcacgcgtgtcacgaagagcaacaagaacgatgatgattacgacgaatac
gacgaagaggaagagcaggacgacgagtcgtcaagctctggtctgcagaagacgcagtcg
ctcattcacatcaagctggacaagcccggcaccctgcgcatcgagagattactggacacg
tcaggcgtcatggcaaaagtcttcacttcggaggtgaccgtcgcgccttgcccgcgtgcc
gagttcaagtcattgccaaaggacggcgacgtccaatgcgcggcaccggacctggagatg
caaatggagatcgacatctatggtgttcctccactcagtatgcgatactccaagatcgtc
aatggtcgtcgtgagctgttcacggtcgagggtgtagaaggcgcggactctggggaatta
ccctcgtcacaacaagcagcgacaagctcgttggcggtcactgaacggaaattcgtccag
agggttgcggcaccacaaacgatcccggtaccgctcgcggcagcattggacacaacagga
actcacacgtatgtcctggaagaagtgaccgatgccgtcggcaactacgcgcgccttggc
caggattcccaactgaagacgacttcgtctgttactgttttgcggagaccggcaatgtca
ttcaagagatgcggtccaggaaagcctacgccggtcctcatcggtgcagagacaagccta
cctgtcgttgccagtgttgccgacgccatggacgcgccttatgaggtcacggtgaagtac
aatccaccgacggacgctcccaggcggtcaagtcccttcacaacaaagtactctacgaac
gactcgaggcaagatgtttcggtcctcgccaaatatcctggcgagtacactatcgttgga
gtccatggaaagtactgcgaaggcgacgttctggcccctgatgtctgcacggtgttcgaa
ctgccaaagccgtccgtcggtgttgagtgggagaagatccatgaatgctctggcgacaca
ggtgttcgtgcgggcttgttgttgcacggcacacctccattccaagtcacctaccaagcc
cagaagggcaggggcacaccacgaacccatacgatgaccttccaatcctctcgagacgag
atcattatccgacctcccgaagagggtgactacatcttcagcatcacgcacatcagcgac
gcgtattacaagaaggaggaagtcaaggcgaagagcatgaagcagacgatccacccagtc
gcatctgccgagtttgctggttctggcaggcgaaagcagagaatgagcatctgcgaggac
cgcactatcgatgttgacgtgcatctgcggggctcggcaccttggaatatcgaactgcag
atcatcagccctagaggcagcatgattcgcacatacaatggcattgacgtctcgccgaag
cgcttgcaaataccgataccggacgaagtcgacaaggctggcggtcacctcgagattgac
ctagttagcgtgcaggataagtccgggtgcaagcgttctctctctactcaaggcatctct
gtggatgttcggagagttaagcctactgtcaagttctacggatccccgagccagcgcgag
attaccgtcctggagaggcaaaagacgcatctcccattgcgtctgactggcgatggtcca
tggaccgtgaagtacaggcgcacggagtctcccagttctgtgctcacggcaaggctcaac
tcgccgaacgatgagctagaggtcgtcgagaagggcacttacgagctcatgggggtgaat
gatgtgatgtgccccggctctgttgttgcggactcgtccaggttcaaggtgaactggata
ccgcggccatcagccaagctcgctgagaacacgccggcaacatatgaaccattcaattcc
tcgcatatcctacaacccgtatgcgctggagacgacgacttcattgaccttgatctctct
ggtcgtcctcccttccaaattatgtacaacatcgccaaggctaacagctactatggccgc
tccgatatcatcgaccagcccacgtacaacagcattcagacgcggacacgcttccagctg
cgcacagatcagcctggacgaatgttgtacgaagtcaagcagattggcgacgtgcactac
cctctggagaaacacaggaacgcgaccatcccgcaacgcgagcgccttctcattgagcag
gacgtgcttgcgcgtccgagtgcgcggttcaagtcgcaggaggcgcgcatgtcgtactgt
gtcaatgacgcgctgacagcacagagcatcgcctctgacgatgggctcgtccttctcgag
ggcacgcctcctttcaccctcaccctcgacgtcggcaagctcggcacgctcgagcatgag
acggtcgaagtgacggtcaacgagtacgcatggaagcttagcctaccggagtatcacttc
aagtcggtcggcacgcatcgggtgtccatccagtccatcgcggacgcgagtggttgcgcg
cacgttccgctcgaccccttccagacctccctgaacattgacgtcgcggagatggcggcg
atcgtgctcttcgacaagcgcgaggacttgtgcgttggggacatcactcagttccaactc
gagggcattccgccgtggaacatcgaataccgcatcaatggtcgcacgcacacggaggtc
gcaaagacatcgcccttcgccctcctgcaacaggcagcgggcgagttcgccgtcacctcc
atcgcacaccagcaacaaaagtgcaaggccgcggtcactgacctgcggtaccgcgtgcac
gcgctcccgtccgccgaagtcgggcacggcggcgcgtactacgacgacatccgcgagggc
gagcaggccaacatcgttttcaccttcatcggcgagccgccgttcacgttcacctaccag
cgcgctgagctggggcgtgggggcaggccagggcgtgtgctggaaacgcatactgtttcg
aagatcgtggactacgactataagatcacatcgaaccaagagggtgtgtggaccgtaacg
tccatcacggacaagtactgtcgctacccgccagcgcaacctgacgtattggacaagagg
aggggataa
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integrated database retrieval system
