Schizophyllum commune: SCHCO_02666924
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Entry
SCHCO_02666924 CDS
T01331
Symbol
SCHCODRAFT_02666924
Name
(RefSeq) DEAD-domain-containing protein
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
scm
Schizophyllum commune
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scm03009
]
SCHCO_02666924 (SCHCODRAFT_02666924)
Enzymes [BR:
scm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SCHCO_02666924 (SCHCODRAFT_02666924)
Ribosome biogenesis [BR:
scm03009
]
Eukaryotic type
90S particles
Helicases
SCHCO_02666924 (SCHCODRAFT_02666924)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
9597831
NCBI-ProteinID:
XP_003038071
UniProt:
D8PRL9
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MSIRAPTDIQAACIPPLLEGRDCIGNAKTGSGKTIAFALPILQKLSVDPFGIFALVLTPT
RELAFQIAEQFAVLGAPLSVRTAVIVGGMDFVAQAIELGQRPHVVVATPGRIVDHLKSSG
GEWDLSRVRMLVLDEADRLLTSTFTPELSYLFGVLPKDRQTALFTATLTDAIEKLADAPP
RPGKQKPVIHRMKESVETVATLKQYYILVPSHVREAYLFHLLAHPPESTLALRRAPPEPT
TKQRKPKKASAVLPDDEVPPPPPPTIIFCHKPRTAAYLTLLLQTLGIRSTALHSRLTQRE
RLASLGLFRAAVVPVLVSTDVGARGLDISDVALVVNWDVPGEAEEYTHRVGRTARAGRHG
VAVSFVTERDEERVLKVEERIKTKLEELVLPEEAVLSKLNAVSTAKRLANMELHDSNFGK
REEIHRAKAAKRRRDEGADDS
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattcgcgcgccgacggatatccaggcggcgtgtattccacctttgctcgagggc
cgcgactgcatcggcaacgcgaagacaggctcgggaaagaccatcgcattcgcccttcca
atcctccaaaagctatccgtcgatccatttggcatcttcgccctggtcctcacgccaacg
agagaacttgcgttccagatcgccgaacaattcgccgtgctcggcgcacccctcagcgta
cgaaccgcggtcatcgtcggtggcatggacttcgtcgcgcaggccatcgagctggggcaa
aggccgcatgttgtcgttgccacacctggaaggattgtggaccatctgaagagcagtggg
ggcgaatgggatttgtcgagggtgcggatgttggttttggacgaggcggacaggttattg
acgtcaaccttcacaccggagctgtcgtatcttttcggcgtactgccgaaggataggcag
acggcgttgttcacggcaacgttgacggacgccattgagaagctcgcggacgcgccaccg
cgcccaggcaagcagaagcccgttattcatcgcatgaaggaatccgtcgaaaccgtggct
accctcaaacaatactatattctcgtcccctcgcacgtccgcgaggcctacctcttccac
ctcctcgcccacccgcccgaatccaccctcgccctccggcgcgccccacccgaacccacc
accaaacaacgcaagcccaaaaaagcctccgccgtcctccccgacgacgaagtgccccca
ccgcccccacccaccatcatcttctgccacaaaccccgcacggccgcctacctcaccctc
ctccttcaaaccctcggcattcggagcaccgcgttgcattcgcggctgacgcaaagggag
cggctggcgtcgctgggtctgttccgcgcagcggtcgtgccggtgctggtgtcgacggat
gtgggcgcgcgtggtttggatatttcggacgtggcgctggtggtgaattgggatgtgccg
ggggaggcggaggagtatacgcatcgggtgggacggacggcgcgtgcggggcggcatggt
gtggccgtgagctttgtgacggagagggatgaggagagggtgctgaaggttgaggagagg
attaaaacgaagttggaggagctagtgctcccggaggaggccgtgctgtcgaagctaaat
gcggtctctacagcgaagcggctggctaacatggagctgcacgactcgaactttggcaag
cgggaggaaatacaccgcgccaaggcggccaaacggcggcgcgacgaaggagcggacgat
tcataa
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