Schizophyllum commune: SCHCO_02668234
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Entry
SCHCO_02668234 CDS
T01331
Symbol
SCHCODRAFT_02668234
Name
(RefSeq) uncharacterized protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
scm
Schizophyllum commune
Pathway
scm04138
Autophagy - yeast
scm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
SCHCO_02668234 (SCHCODRAFT_02668234)
04148 Efferocytosis
SCHCO_02668234 (SCHCODRAFT_02668234)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scm04131
]
SCHCO_02668234 (SCHCODRAFT_02668234)
Membrane trafficking [BR:
scm04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
SCHCO_02668234 (SCHCODRAFT_02668234)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
TPR_19
TetR_C_11
SOG2
Motif
Other DBs
NCBI-GeneID:
9589384
NCBI-ProteinID:
XP_003032042
UniProt:
D8Q3Y8
LinkDB
All DBs
Position
Unknown
AA seq
1075 aa
AA seq
DB search
MPPFNDPTPLISSFKEKVECATGQGDRLYLGTATGSLYVYGVEYEPVEGKEAATLVECKK
NISRRAIEQVAFIKDVNSVAILSDSTVTLLPLPSFAPPTPLVKAKGALSFAVNTSIQHLQ
PYGKPVDSDAGKSPKAIPTLITQLVIGCRRRVVIYSWRDGDAQDTKELVLPHSPRAMAFL
NPDVVCFGYSPTEYATFDIPAMTVTDISTPPPPQPSTTTAMGVGAFTGLSGYMALALGAR
QKPEVLQVAENEGLITKDTEGIFVGPEGKVTRPSTIQWPTSPEDIAYVKPYIFCSFPAGT
VPDRASPINTTQQFHQTSVVQLYSALSMQAVQTVPYPFAAPESTSTSTLASTSTSPTKAS
ATSTATIPNATLRLLTAPPQPKSTSKSPLLLALSTPTDKAAAAAEGSTVWQFRMKPWAQQ
LDELVIEGEYASALALLEEVEDGVLDDKPQRCSLIKALNAVAQFKAGQYDDAILAFLSLD
VNPAKVVALYPPEISGRLAVPREEWIPLFGGPESPSSSAGETKSTTGDAKSMTGTTGSGG
EGTTTSTIPPTSSSESLAQQAAEKQAPAGHARKASVATESRLESVKRRLRPASILGSDDD
DTASIRNDLRRSVDALMRYLSDRRAKAAAALHALHIDSQQDGITPLSEASLDEIFSLPNA
PLSSLTPEQLVRFAQIVDTGLFKSYLLIQPALLRPLCSRPNWCEVTEVEEELRARKKFVE
LRSLYYGKRMHGKALDLLRQLGEEEDDMETKLMPSVDYLARLGPEYMDLIFRYSRWIFEQ
DRDIAFQIFTSEEVELPRQAVADFLQSIGPEVCARFIEYIIDERGEESPLFHDRLAELYL
QLTMGARKRGDDAARSEAYNKLLAFLDNTHHYRVDRIYSLLSGTDLYEARAILLGRLGRH
DQALELYVYKLQDYIKAEEYCKRIYASNPGSTIFLTLLRIYLRPRDPSNTHLLAPALDLV
GRHGPRLDPLAVLELVPPLVTAQDIRPFLIDALRAPLFDSHVVRHIHKARSEQVARKLMS
LQSRRVRITDTWTCPNCHKRLGNTVIAVHSPRGEVTHYHCREAFSKKLREMRPTT
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgccgccattcaacgaccccacgcccctcatttcctccttcaaggagaaagtcgagtgc
gcgacgggccaaggcgacaggctttacttggggaccgcgactgggagtttgtatgtgtat
ggggtggaatatgagccagttgagggcaaggaggcggcgacgctcgtcgagtgcaagaag
aatatatcgcgacgagcgatagagcaagtcgcattcatcaaggacgtgaactcggtcgct
atactctcggattcgacggttactctcctccccctgccctcctttgctccgcctaccccc
ctcgtcaaggccaagggcgcgctatccttcgcggtcaacacatccatacaacatctgcag
ccatatggcaagccggtagactcggacgcgggcaagagcccgaaagccatacccactctg
atcacccaactcgtcattgggtgcaggcgacgcgtcgtcatctatagctggagagacgga
gacgcgcaggacaccaaggaacttgtacttcctcactctccgcgagcgatggccttcctg
aaccctgatgtcgtctgctttggctactcccccacggaatacgccaccttcgacatcccc
gcgatgaccgtcaccgatatctccaccccaccacctccacagccatctacaactactgcc
atgggcgtcggcgccttcaccggcttgtcaggctacatggcgctcgcactgggtgcgaga
cagaagcccgaggtcctgcaggtcgcggagaacgagggactgatcacaaaggataccgag
ggtatctttgttgggcctgagggcaaggtgacgaggccatccacgatacagtggccgacg
tcgccggaggacatcgcctacgtgaagccctatattttctgctcattccccgccggcact
gtccccgaccgcgcctcgccaatcaatacgacgcagcagtttcaccagacctccgttgtc
cagctctactccgcgctctctatgcaagccgtgcagaccgtgccatacccattcgctgcg
ccagagtctacttctacatccaccctcgcctctacatctacgtcccccaccaaagcctcc
gcaacgtcaactgccaccatcccgaacgccaccctccgcctcctcactgccccgccgcag
cccaagtcgacatccaagtcgccattactgcttgcgctctcgacacccacggacaaggcc
gcggcagcggctgagggcagcacggtatggcagttccgcatgaagccgtgggcgcagcaa
ctggacgagttggtgattgagggggagtatgcgagcgcgctagcactgttggaagaagtc
gaagatggtgtcctggatgacaagcctcaacgctgctcgctcatcaaagccctcaacgcc
gtcgcacagttcaaggccggccagtacgatgatgcgatcctagccttcctgagcctggac
gtgaacccagcgaaggttgtcgcactgtacccgccggagatctctgggcgtctggcggtg
cccagagaggagtggatcccgctattcggtgggccggagagtccgtcgtctagcgctggg
gaaacgaagtcgacaacgggggacgcaaagtcgatgacggggacgacagggtcgggtggt
gagggtacgactacatcgacgatcccgcccacgtcttcctcggagtctttggcgcagcag
gcggcggaaaagcaggcgcctgcggggcacgcgaggaaagcaagtgtggcgacagagtcg
aggttagagagcgtgaagaggcggttgaggccagcatcgattctgggtagtgacgatgat
gacacggcgtccatccgcaacgaccttcgccgctccgtcgatgccctcatgcgctacctc
tctgaccgccgtgctaaagcagcagcagcccttcacgctctccacatcgactcccagcag
gacggcatcacccccctctccgaggcctccctcgacgagattttctccctccccaacgca
cccttgagcagcttgacgcctgaacaattggtccgctttgcgcagatcgtggacaccggc
ctgttcaaatcgtacctgctgatccagccagcgctgctgcgcccgctgtgtagtcggccg
aattggtgcgaggtgacggaggtggaggaggaactgagggcacggaagaaattcgtggag
ctgaggtcgttgtactacggcaagaggatgcatgggaaggcgcttgacttgttgcggcag
ttgggcgaggaggaagacgatatggagaccaagcttatgccctcggtcgactacctcgca
agattgggcccagagtacatggacttgatattccgatactcacgatggatattcgagcag
gaccgtgacattgccttccagatcttcacatcggaagaggtcgagctccctcggcaggcc
gttgccgacttcctgcagagcatcggacccgaggtttgcgcacggtttatcgagtacatc
atcgacgaaagaggggaagagtcgccgctattccacgacaggctggcggagctgtatctg
caactgacgatgggcgctcggaagcgcggcgatgatgctgcacgctcagaggcctataac
aagctgctggcattccttgacaatacccaccactatcgcgtcgacaggatatactcgctg
ctgtccgggactgacctgtacgaagcacgagcaattcttcttggccgactaggcagacac
gaccaagccctcgagctatacgtgtataaattacaggactacatcaaggcagaagagtac
tgcaaacggatctacgcatccaaccccggcagcaccatcttcctcaccctcctccgcata
tacctccgaccacgagatcccagcaacacgcacctccttgcacccgccctcgacctcgtc
ggtcgacacggtccccgactagacccgctcgccgtacttgagctggttccaccattggtg
actgcgcaggacattcgaccattcctcatcgatgccctccgcgcgcccttgtttgattcg
cacgtcgtgcggcatattcataaggcgcgcagcgagcaggtggcgaggaagctgatgtcg
ctgcagtcgaggagagtgaggataacggatacgtggacatgtccgaattgccacaagcga
ctggggaacacggtcatcgcggtacattcgccaagaggcgaggttacacattatcattgc
agggaggcattctcgaagaaactcagagagatgcgaccgacgacatga
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