KEGG   Schizophyllum commune: SCHCO_02677401
Entry
SCHCO_02677401    CDS       T01331                                 
Symbol
SCHCODRAFT_02677401
Name
(RefSeq) WD40 repeat-like protein
  KO
K12857  Prp8 binding protein
Organism
scm  Schizophyllum commune
Pathway
scm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:scm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SCHCO_02677401 (SCHCODRAFT_02677401)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:scm03041]
    SCHCO_02677401 (SCHCODRAFT_02677401)
Spliceosome [BR:scm03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    SCHCO_02677401 (SCHCODRAFT_02677401)
 Complex C
   U5 SnRNP specific factors
    SCHCO_02677401 (SCHCODRAFT_02677401)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I ANAPC4_WD40 WDR90_beta-prop_4th NBCH_WD40 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_Vps41 PQQ_2 TibC_1st Beta-prop_RIG_1st WD40_like Cytochrom_D1 Beta-prop_NUP159_NUP214 DUF5711 DUF7165
Other DBs
NCBI-GeneID: 9595099
NCBI-ProteinID: XP_003037788
UniProt: D8PNE5
LinkDB
Position
Unknown
AA seq 369 aa
MSKRPNADSDGALVKRARSNEPGPTNQIAISSAGDDSKKGLIRTVQRTSNLEAPIVSLAG
AHSGEILSCRFDPTGQNIAACSADRSVSLWRTYPPNTNYGLLQNLAKAPILDLQWSLCSP
LIYTVAADHTLTYTDVTTGERVRKIRAHREIINALDRTMASGSGQELVATASDDGTVKVW
EGGEEASKQAIATFEVGCPATAVCWSADGAQLYVGALDNEIHVYDLRKGEQVYTLTGHTD
TPTSIALSPNGNYILSPSLSSLTIIHDVRPFSPTPTRVHRILQGAPAGFENTLLRGAWSK
EDGGRRVAVGGADRTVCIWDVETGKILYKLPGHKGTVTAVDFHPKEPIILTGSKDGTMLL
GEIEPTNVA
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgtctaaacgcccgaatgccgacagcgatggcgctctcgtgaagcgcgcccgttccaat
gagcctggcccaacgaaccagattgccatctcgtctgcaggggacgacagcaaaaaggga
cttatcaggaccgtccagcgaaccagcaacctcgaagcgcccattgtatctcttgccgga
gcacattcgggggaaattctgagctgccgatttgacccaacgggacaaaacattgcagcc
tgctcagccgacaggagcgtctccctttggcgtacctaccccccaaacaccaattacggc
cttctccagaaccttgccaaggcccccattcttgacctccaatggtccctctgttccccc
ctcatctacaccgtcgccgccgaccacacgctcacctacacggacgtcaccaccggcgag
cgcgtgcgtaagatccgcgcgcaccgcgagatcatcaacgcgctcgacaggacgatggcg
agtgggagcgggcaggaactcgtggcgacagcgtccgacgacgggacggtgaaggtgtgg
gagggcggggaggaggcgtcgaagcaggctatcgcgacgttcgaggtcggatgtcccgcg
acggcggtgtgctggagcgcagatggggcgcagctgtatgtgggcgcgttggacaacgag
atccatgtgtacgaccttcgcaagggcgagcaggtatacacgctcacagggcacacggac
acgccgacatccattgcactgtcgcccaacggcaactacatcctttccccctccctctcc
tccctcacgatcattcatgacgtccgcccgttctcgccaacacccacgcgtgtacaccgc
atcttgcaaggagccccagccggctttgagaacacgttgctgagaggcgcgtggagcaag
gaggatggtgggcgccgcgtcgctgtcggcggcgcggaccgtaccgtctgcatctgggat
gtggagaccggaaagattctgtacaagcttcctgggcataagggcacagtaacagcggtt
gacttccacccgaaggagccgatcatccttaccggaagcaaggacggcacgatgctcttg
ggcgaaatcgagccgacgaacgttgcataa

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