Schizophyllum commune: SCHCO_02677401
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Entry
SCHCO_02677401 CDS
T01331
Symbol
SCHCODRAFT_02677401
Name
(RefSeq) WD40 repeat-like protein
KO
K12857
Prp8 binding protein
Organism
scm
Schizophyllum commune
Pathway
scm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SCHCO_02677401 (SCHCODRAFT_02677401)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scm03041
]
SCHCO_02677401 (SCHCODRAFT_02677401)
Spliceosome [BR:
scm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
SCHCO_02677401 (SCHCODRAFT_02677401)
Complex C
U5 SnRNP specific factors
SCHCO_02677401 (SCHCODRAFT_02677401)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
ANAPC4_WD40
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_Vps41
PQQ_2
TibC_1st
Beta-prop_RIG_1st
WD40_like
Cytochrom_D1
Beta-prop_NUP159_NUP214
DUF5711
DUF7165
Motif
Other DBs
NCBI-GeneID:
9595099
NCBI-ProteinID:
XP_003037788
UniProt:
D8PNE5
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MSKRPNADSDGALVKRARSNEPGPTNQIAISSAGDDSKKGLIRTVQRTSNLEAPIVSLAG
AHSGEILSCRFDPTGQNIAACSADRSVSLWRTYPPNTNYGLLQNLAKAPILDLQWSLCSP
LIYTVAADHTLTYTDVTTGERVRKIRAHREIINALDRTMASGSGQELVATASDDGTVKVW
EGGEEASKQAIATFEVGCPATAVCWSADGAQLYVGALDNEIHVYDLRKGEQVYTLTGHTD
TPTSIALSPNGNYILSPSLSSLTIIHDVRPFSPTPTRVHRILQGAPAGFENTLLRGAWSK
EDGGRRVAVGGADRTVCIWDVETGKILYKLPGHKGTVTAVDFHPKEPIILTGSKDGTMLL
GEIEPTNVA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgcccgaatgccgacagcgatggcgctctcgtgaagcgcgcccgttccaat
gagcctggcccaacgaaccagattgccatctcgtctgcaggggacgacagcaaaaaggga
cttatcaggaccgtccagcgaaccagcaacctcgaagcgcccattgtatctcttgccgga
gcacattcgggggaaattctgagctgccgatttgacccaacgggacaaaacattgcagcc
tgctcagccgacaggagcgtctccctttggcgtacctaccccccaaacaccaattacggc
cttctccagaaccttgccaaggcccccattcttgacctccaatggtccctctgttccccc
ctcatctacaccgtcgccgccgaccacacgctcacctacacggacgtcaccaccggcgag
cgcgtgcgtaagatccgcgcgcaccgcgagatcatcaacgcgctcgacaggacgatggcg
agtgggagcgggcaggaactcgtggcgacagcgtccgacgacgggacggtgaaggtgtgg
gagggcggggaggaggcgtcgaagcaggctatcgcgacgttcgaggtcggatgtcccgcg
acggcggtgtgctggagcgcagatggggcgcagctgtatgtgggcgcgttggacaacgag
atccatgtgtacgaccttcgcaagggcgagcaggtatacacgctcacagggcacacggac
acgccgacatccattgcactgtcgcccaacggcaactacatcctttccccctccctctcc
tccctcacgatcattcatgacgtccgcccgttctcgccaacacccacgcgtgtacaccgc
atcttgcaaggagccccagccggctttgagaacacgttgctgagaggcgcgtggagcaag
gaggatggtgggcgccgcgtcgctgtcggcggcgcggaccgtaccgtctgcatctgggat
gtggagaccggaaagattctgtacaagcttcctgggcataagggcacagtaacagcggtt
gacttccacccgaaggagccgatcatccttaccggaagcaaggacggcacgatgctcttg
ggcgaaatcgagccgacgaacgttgcataa
DBGET
integrated database retrieval system