Schizophyllum commune: SCHCO_02682841
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Entry
SCHCO_02682841 CDS
T01331
Symbol
SCHCODRAFT_02682841
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K10755
replication factor C subunit 2/4
Organism
scm
Schizophyllum commune
Pathway
scm03030
DNA replication
scm03410
Base excision repair
scm03420
Nucleotide excision repair
scm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCHCO_02682841 (SCHCODRAFT_02682841)
03410 Base excision repair
SCHCO_02682841 (SCHCODRAFT_02682841)
03420 Nucleotide excision repair
SCHCO_02682841 (SCHCODRAFT_02682841)
03430 Mismatch repair
SCHCO_02682841 (SCHCODRAFT_02682841)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scm03032
]
SCHCO_02682841 (SCHCODRAFT_02682841)
03036 Chromosome and associated proteins [BR:
scm03036
]
SCHCO_02682841 (SCHCODRAFT_02682841)
03400 DNA repair and recombination proteins [BR:
scm03400
]
SCHCO_02682841 (SCHCODRAFT_02682841)
DNA replication proteins [BR:
scm03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
SCHCO_02682841 (SCHCODRAFT_02682841)
DNA Replication Termination Factors
ELG1-RFC complex
SCHCO_02682841 (SCHCODRAFT_02682841)
Chromosome and associated proteins [BR:
scm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
SCHCO_02682841 (SCHCODRAFT_02682841)
DNA repair and recombination proteins [BR:
scm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
SCHCO_02682841 (SCHCODRAFT_02682841)
Check point factors
HRAD17(Rad24)-RFC complex
SCHCO_02682841 (SCHCODRAFT_02682841)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_22
AAA_11
AAA_assoc_2
AAA_2
AAA_24
AAA_16
RuvB_N
AAA_5
Mg_chelatase
AAA_7
AAA_19
AAA_30
SLFN-g3_helicase
AAA_28
bpMoxR
ResIII
DUF815
Motif
Other DBs
NCBI-GeneID:
9597392
NCBI-ProteinID:
XP_003035135
UniProt:
D8PWL4
LinkDB
All DBs
Position
Unknown
AA seq
376 aa
AA seq
DB search
MASSFFKPQNRQNQQAATAQRHTVDPALQPWVEKYRPKTIDDVSAQEHTVSVLQKALTST
NLPHMLFYGPPGTGKTSTILALSRQLFGPDNFRSRVLELNASDERGISIVREKVKNFARQ
TPRAQAVASDGKEYPCPPYKIIILDEADSMTQDAQGALRRIMETHARITRFCLVCNYVTR
IIEPLASRCSKFRFTPLDSSSAAARLSYIATNENVAVSPPVIDTLISTSGGDLRRAITYL
QSASRLSSSTDPPTPITPVDIQEIAGVVPDGVIDNFARAVGIEVDGSDAMDVDGLQRRGF
QLVQSKVKEVMRDGYSATQILTQLHDLVILHPTLSARNKAQSALVFAEADKALCDGADEE
LWILEVGLRLNKIFTA
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctccttcttcaagccccagaaccgccagaaccagcaggcagcaaccgctcaa
agacatacggtggacccagcactgcagccatgggtagagaaataccgcccaaaaaccatc
gacgatgtgtccgcgcaagagcacactgttagcgtgctgcagaaggcgttgacctccaca
aatctccctcacatgctgttctatggtcctcctgggactggaaagacatctaccattctc
gctctgtcacgacaactgttcggtccagacaacttccgtagccgcgtcctcgagctcaac
gcttcagatgaacgcggtatcagcatcgttcgagagaaggtcaagaactttgcccgtcaa
acaccaagagcccaagcggtcgcctcagatgggaaggaatacccatgtcccccatacaag
atcatcatcctggacgaggcagactccatgacccaagacgctcaaggcgccctccgtcga
atcatggagacgcacgcacgcatcacccgcttctgcctcgtctgcaactacgtgacacga
ataatcgaacccctcgcctcccgctgctctaagttccgcttcacccccctcgactcctcc
agcgccgccgcccgcctctcctacatcgccacgaacgaaaacgtcgccgtctccccgccc
gtcatcgacaccctcatctccacctcgggcggcgacctccgccgcgccatcacctacctc
cagtccgcgtcccgcttgtcctcgtcgaccgatcctccgacacccatcacgcccgttgat
attcaggagattgctggcgtggtgccagatggtgtgattgacaactttgcgcgtgcggtg
gggattgaggtcgatgggtcggacgcgatggacgtcgatgggttgcaacggcgagggttt
cagctcgtgcagagcaaggtgaaggaggttatgcgtgatggttattcggcgactcagata
ttgacgcagctacacgacctcgtcatcctgcaccccacgttgagcgcacgcaacaaagca
caatccgctctcgtcttcgcagaagcggacaaggcgctctgcgacggcgcggacgaagaa
ctctggatcttggaagtcggtctccgcctaaacaagatattcactgcatag
DBGET
integrated database retrieval system
