KEGG   Schizophyllum commune: SCHCO_02691379
Entry
SCHCO_02691379    CDS       T01331                                 
Symbol
SCHCODRAFT_02691379
Name
(RefSeq) Metallo-hydrolase/oxidoreductase
  KO
K14403  cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
scm  Schizophyllum commune
Pathway
scm03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:scm00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    SCHCO_02691379 (SCHCODRAFT_02691379)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scm03021]
    SCHCO_02691379 (SCHCODRAFT_02691379)
   03019 Messenger RNA biogenesis [BR:scm03019]
    SCHCO_02691379 (SCHCODRAFT_02691379)
Transcription machinery [BR:scm03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     SCHCO_02691379 (SCHCODRAFT_02691379)
Messenger RNA biogenesis [BR:scm03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     SCHCO_02691379 (SCHCODRAFT_02691379)
    U7-dependent histone pre-mRNA processing factors
     SCHCO_02691379 (SCHCODRAFT_02691379)
SSDB
Motif
Pfam: CPSF73-100_C Beta-Casp Lactamase_B_6 Lactamase_B RMMBL Lactamase_B_2 Lactamase_B_3
Other DBs
NCBI-GeneID: 9591272
NCBI-ProteinID: XP_050198915
LinkDB
Position
Unknown
AA seq 798 aa
MADSANLKITMLGAGQEVGRSCCVLQYRGRTIVCDTGIHPAHTGMASLPFIDDLDWSTVD
AILITHFHLDHAASLTYITEKTNFRDGKGKIYMTHPTKALHKFMMQDFVRTGSSSSDALF
SPLDISMSLASIIPVSAHQLITPCPGVSFTPYHAGHVLGACMFLIDMAGLRILYTGDYSR
EEDRHLVKAELPPIRPDVLIVESTYGVQSHEPRDEKELRFTNLVHSIIRRGGHVLLPQFA
LGRAQELLLILDEYWKKHPDLHNVPIYYASGLARKSMAVYQTYIHTMNSNIRSRFAKRDN
PFVFKYISNVPQPRGWEKKIAEGPPCVVLATPGFMQTGSSRELFELWAPDSRNGLIVTGY
SVEGTLARDIMTEPEEFQSVKGHMIQRKISVDYISFSAHVDYTQNAEFIETVRAQHVVLV
HGEQTAMGRLRAAMSSRYKERDEDVKIHTPRNLETLELSFRGERVAKAIGTLADKPPQSS
DVLSGLLVAKDYSYTLLDPRDLKDFAGLSTCVVTQRQRVALDVQYELVRWHLEGMYGKLE
EGLDKDGVRTIRVMGVLDVKDVGNGMWLLEWESGASHDMIADSTFALLTSIDKSPASAKL
THKPCAHKHPHADPEEWGEGERMSRVQKLASFLEVHFGDVEWHDTDGSEEVTELGQEANE
PHFIVRLDEAVAQINLLSLTIFSTNDTLKKRVESVLDMAVTTVTSLAESFTSAEPLTVDS
ESDPTLTEKEKGEKRGNDGVIVPNSAIMAPPSEEEEIAAAKAAMAKRKEEEAAEAAAKEK
EGSDAGSDGGDGMLEVHD
NT seq 2397 nt   +upstreamnt  +downstreamnt
atggctgacagcgcgaacctcaaaattacgatgctcggcgctggccaggaggtcgggcgc
tcttgttgtgttctccagtatcgcggacgaacaatagtctgcgacactggcattcaccct
gcacatactggcatggcctcgttacccttcattgacgacttggactggagtacagtggat
gctatactcattacccattttcatcttgaccatgcagcgtccttgacgtacataaccgaa
aagaccaatttccgcgacggcaaggggaagatatacatgacgcatcccacgaaggcgcta
cacaaattcatgatgcaggactttgtccggacaggatcttcttcttctgacgccctcttc
tcacccttggacatctcaatgtccctcgcctccatcatccccgtatccgctcatcaactc
atcactccatgtcctggagtctccttcaccccctaccacgctggccacgtcctgggcgcc
tgcatgttcctcatcgacatggccggcctccggatactctacaccggtgactactcccgc
gaagaagaccgtcatcttgtcaaggcggagcttccgccaatacggcccgacgtcctcatc
gtcgaaagcacctacggcgtgcaaagccacgaaccacgagacgaaaaggagctgcgtttt
actaatcttgttcattcaatcatccggcgaggagggcatgtactgcttcctcaattcgct
ttgggacgtgcgcaagaattactgctcatcttggacgaatattggaagaagcacccggac
ctgcacaatgtgcccatttactacgcatctggcctggcgaggaaatctatggccgtctac
caaacatacatccacaccatgaactccaacatccgctcacgatttgcgaagcgcgataac
cccttcgtcttcaaatacatctccaacgtcccccaaccgcgcggctgggaaaagaagatc
gctgagggcccaccctgcgtcgtacttgcgacgcccgggttcatgcagaccggctcctct
cgcgagctcttcgagctgtgggcgccggactcgcggaatggcctgattgtcacagggtat
tcggtggaggggacgctagctagggacatcatgacggagcccgaggagttccagtcggtg
aaggggcacatgatccagcgcaagatctcggtggactacatctcgttcagcgcgcatgtg
gactacacgcagaacgcggagttcatcgagacggtgagggcgcagcatgtggtcttggta
cacggcgagcagacggcgatgggccggttgcgggcggcgatgtcgtcgaggtataaggaa
agggacgaggatgtgaagatccatacgccacggaacttggaaaccctagagctatctttc
cgcggggagcgggtagcgaaggccatcggcaccctcgccgacaagcccccgcaatccagc
gacgtcctctccggtttactagtcgccaaggactactcctacaccctcctcgacccgcgc
gacctgaaggacttcgcgggcctgtcgacgtgcgtggtgacgcagcggcagcgcgttgca
ttggacgtgcagtacgagctggtgaggtggcacttggaggggatgtacgggaaattggag
gaggggctggataaggatggggtgaggacgataagggtcatgggcgtgctggacgtcaag
gacgtgggcaatgggatgtggttgttggagtgggagtcgggcgcgagccatgatatgatt
gcggactcgacgttcgcgctgttgacgtccatcgacaagagccccgcgagtgctaagcta
acccacaaaccctgcgcgcacaagcacccacacgcagaccccgaggaatggggcgaaggc
gagcgcatgtcgcgcgtgcagaaactcgcgagcttcctcgaggtgcacttcggcgacgtc
gagtggcacgacacggatgggtcggaggaggtgacggagctcgggcaggaggcgaatgag
ccgcattttatcgtgcggttggatgaggcggtggcgcagatcaatttattatcgttgacc
atcttcagcacgaacgacacgctcaaaaagcgcgtcgagagcgtgctcgacatggccgtc
accactgtcacctccctcgccgagtccttcacctccgccgagccgctcaccgtggactcc
gaatccgaccctaccctcaccgaaaaagagaagggcgaaaagcgcggcaatgacggcgtg
atcgtgccgaatagcgcgatcatggcgccgccgtcggaggaggaggagatcgcggcggcg
aaggcggctatggcgaagaggaaggaggaagaggcggcggaggcggcggcgaaggagaag
gagggaagcgatgcggggtcggatggtggggatgggatgctggaggtgcatgattga

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