KEGG   Schizophyllum commune: SCHCO_02697393
Entry
SCHCO_02697393    CDS       T01331                                 
Symbol
SCHCODRAFT_02697393
Name
(RefSeq) WD40 repeat-like protein
  KO
K10752  histone-binding protein RBBP4
Organism
scm  Schizophyllum commune
Pathway
scm03082  ATP-dependent chromatin remodeling
scm03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:scm00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    SCHCO_02697393 (SCHCODRAFT_02697393)
   03083 Polycomb repressive complex
    SCHCO_02697393 (SCHCODRAFT_02697393)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:scm03036]
    SCHCO_02697393 (SCHCODRAFT_02697393)
Chromosome and associated proteins [BR:scm03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     SCHCO_02697393 (SCHCODRAFT_02697393)
  Histone modification proteins
   HAT complexes
    HATB complex
     SCHCO_02697393 (SCHCODRAFT_02697393)
   HDAC complexes
    Sin3A-HDAC complex
     SCHCO_02697393 (SCHCODRAFT_02697393)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     SCHCO_02697393 (SCHCODRAFT_02697393)
    PRC2.2
     SCHCO_02697393 (SCHCODRAFT_02697393)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     SCHCO_02697393 (SCHCODRAFT_02697393)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    SCHCO_02697393 (SCHCODRAFT_02697393)
  Chromatin remodeling factors
   NuRD complex
    SCHCO_02697393 (SCHCODRAFT_02697393)
   NuRF complex
    SCHCO_02697393 (SCHCODRAFT_02697393)
   NuRF complex (fruit fly)
    SCHCO_02697393 (SCHCODRAFT_02697393)
SSDB
Motif
Pfam: CAF1C_H4-bd WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_EML_2 WD40_WDHD1_1st WD_LRWD1 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st EIF3I Beta-prop_EML WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_IFT80_2nd Beta-prop_RIG_1st Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 9589012
NCBI-ProteinID: XP_003037000
UniProt: D8PM44
LinkDB
Position
Unknown
AA seq 497 aa
MPRPQAEEVEDDFAAEEENKLINEEYKTWKKNAPYLYDVVITHALDWPSLTCQWFPDKES
QPSKPYDTHRLLLGTHTSGQAQDYLQIATVQIPKTSGPSSDKLDHSSYDDERGELGGHTL
PPAPRVKIVQRINHDGEVNRARYMPQNADLIATKAVSGEVFVFDRTKHSSDPDRSGQCKP
DIRLVGQRGEGFGLAWSPVKQGHILSASEDMTVCHWDINAYAKSNPSLEPTTVFRGHTSV
VGDVDWHPTKENVLASVGDDKMLMIWDTRASKEPSNKILAHDNEILSVAFNPAAEHLIVT
GSADKTAVLHDLRVPNRKLHIFESHTDEVLHVAWSPHNPTIFASASSDRRINIWDLSLIG
VEQTPDDQEDGPPELLFIHGGHTARPTDFCWAPGAEENWNLSSTSEDNIVMVWQPTMRVW
AGDEIRVDEKELEDDAMEGVEASSAAGGSGGPSSHAGASGAGKPGGALGLEMGPAAGEGE
AKREQSMSSRSMSLGDD
NT seq 1494 nt   +upstreamnt  +downstreamnt
atgcctcgcccccaagctgaggaagtggaggatgatttcgccgccgaggaggagaacaaa
ctgatcaatgaggaatacaagacatggaagaaaaacgcgccctacctctacgacgtcgtg
atcacacacgcgctcgactggcccagtctcacctgccaatggttccccgacaaggaatcc
caaccctccaaaccctacgacacccaccgcctcctcctcggcacccacacctccggccag
gcgcaggactacctccagatcgccaccgtccagatccccaagacctccggcccctcctcc
gacaagctcgaccactcgtcgtacgacgacgagcgcggcgagctcggcgggcacacgctc
ccgcccgccccgcgcgtgaagatcgtgcagcgcatcaaccacgacggggaggtcaaccgc
gcgcggtacatgccgcagaacgcggacctgatcgcgacgaaggcggtcagtggggaggtg
tttgtgttcgatcggacgaagcactcgagcgatccggataggagtgggcagtgtaagccg
gatatccgcttggtggggcagaggggggaaggctttggtctggcttggagtcccgtaaag
cagggtcacatcctgagtgcctcggaggacatgacggtgtgccactgggacataaacgca
tacgcaaagagcaacccctccctcgagcccactacagtattccgcggacatacctcggtc
gtcggcgatgttgactggcatccgacgaaagaaaatgttcttgccagtgttggagatgac
aagatgctgatgatctgggacactcgtgcatccaaagagccgagcaacaagatcctggcc
cacgacaacgaaattctatctgttgcatttaacccggcagcagagcacctcatcgtcacc
ggcagcgctgacaaaaccgccgtccttcacgacttgcgagtaccaaaccgcaagctgcac
atcttcgagtcgcacacggacgaagttctgcacgtcgcatggtcgccacacaacccgacc
atcttcgcaagcgcctcgagcgaccggcgaatcaacatttgggacctctcacttattggt
gttgagcagacgcccgacgatcaggaagacggcccaccggagctgctcttcattcacgga
ggccacaccgcgcgcccgaccgacttctgctgggcgcccggcgcggaggagaactggaac
ctgtcgagcacgtccgaggacaacatcgtcatggtctggcagccaacgatgcgcgtgtgg
gccggtgacgagatccgggtggacgagaaggagctggaggacgacgcgatggagggcgtg
gaggcgagcagcgcggcgggcgggtcgggtggcccatcgagtcatgcgggagcatcggga
gcgggcaagccgggcggcgcgctggggctggagatgggacctgcggcgggagagggagag
gcgaagagggagcagagcatgagcagccggagtatgagcttgggtgatgattga

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