KEGG   Schizophyllum commune: SCHCO_02699242
Entry
SCHCO_02699242    CDS       T01331                                 
Symbol
SCHCODRAFT_02699242
Name
(RefSeq) uncharacterized protein
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
scm  Schizophyllum commune
Pathway
scm03020  RNA polymerase
scm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:scm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SCHCO_02699242 (SCHCODRAFT_02699242)
  09124 Replication and repair
   03420 Nucleotide excision repair
    SCHCO_02699242 (SCHCODRAFT_02699242)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scm03021]
    SCHCO_02699242 (SCHCODRAFT_02699242)
   03400 DNA repair and recombination proteins [BR:scm03400]
    SCHCO_02699242 (SCHCODRAFT_02699242)
Transcription machinery [BR:scm03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     SCHCO_02699242 (SCHCODRAFT_02699242)
DNA repair and recombination proteins [BR:scm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      SCHCO_02699242 (SCHCODRAFT_02699242)
SSDB
Motif
Pfam: RNA_pol_Rpb4 MRS2-like
Other DBs
NCBI-GeneID: 9595819
NCBI-ProteinID: XP_003033367
UniProt: D8Q183
LinkDB
Position
Unknown
AA seq 135 aa
MTTRLRPRTQLEEEDATTLKLGPEFAQAGCLLISEVKYLLENREKTAPDNAVYAKTLDYV
KTFAKWHTTDSASAVREILRREPQLTQFETAQLANLCPAEAEEAKSIIPSLEDKVDDDRL
QALLNEIQTMRKFQT
NT seq 408 nt   +upstreamnt  +downstreamnt
atgaccacccgcctccgtccccgcacgcagctcgaggaagaggatgcgacgacgttgaag
ctgggcccagagttcgcccaggcgggttgtttgctcatctcagaggtcaagtatctgctg
gaaaaccgagagaagactgcgccggacaatgctgtgtacgcaaagacgttggactatgtc
aagaccttcgcgaaatggcatacgacggactcggcgagcgcggttcgagagatcctgcga
cgcgagccccagttgacacagttcgagacggcacagctcgcgaacctttgccccgcggag
gcggaggaggcgaagagtatcattcctagtctggaagacaaggttgacgatgatcggctg
caagccctcctgaacgagatccagacgatgcgcaagttccagacatga

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