Schizophyllum commune: SCHCO_02701711
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Entry
SCHCO_02701711 CDS
T01331
Symbol
SCHCODRAFT_02701711
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
scm
Schizophyllum commune
Pathway
scm03013
Nucleocytoplasmic transport
scm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SCHCO_02701711 (SCHCODRAFT_02701711)
03015 mRNA surveillance pathway
SCHCO_02701711 (SCHCODRAFT_02701711)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scm03019
]
SCHCO_02701711 (SCHCODRAFT_02701711)
Enzymes [BR:
scm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SCHCO_02701711 (SCHCODRAFT_02701711)
Messenger RNA biogenesis [BR:
scm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
SCHCO_02701711 (SCHCODRAFT_02701711)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
9589378
NCBI-ProteinID:
XP_003032029
UniProt:
D8Q3W9
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MATLKKDEDGWVEGEAPAPEPQQTDLLEPTHDVQVTLADPTLDADSPLYSVKNFEELGLH
QSLRDGLVAMGFNRPSKIQERALPMLLRDPPTNFIGQSQSGTGKTAAFVLTMLSRINPDL
QSTQAICIAPSRELARQIMSVVTLMGKFTKITTEFAIKDDNGPPTKHKVNAHLVVGTPGT
MATYLQKRIINKDTVKVFVVDEADQMIAQDGLGDHTTRVKNLLGSPGQPGNLRYQTILFS
ATFNDNVRGFADRFAPHANKIELKKEEVNVGTIKQFFLDCVSKQDKYDKLVMLYNILTVG
QSIIFCQYRQEADQIAQRMIKEGHKVAALHGAKDGSERDQIIDRFREGHEKVLITTNVIA
RGIDILQVNMVVNYDLPLMSERDKNRYGSNNDKPDLETYIHRIGRTGRFGRRGISISFVH
DQQSYDLLKVLEREMGREIQAIPTKGKDEGQIEDYVKDLLKKDTTVGSAK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggctaccctcaagaaagacgaagacggatgggtggaaggagaggcgccggcacctgag
cctcagcagactgacttgctggagccgacgcacgatgttcaggtcactctcgccgatccg
accctcgacgccgacagcccgctgtacagcgtcaagaactttgaagaactcggcctacac
cagagcctgcgagacggcctggttgcaatgggcttcaaccgaccatccaagatccaggag
agggcgctaccgatgctcctgcgtgatccaccaacaaacttcatcggccagtcgcagtct
ggcacggggaagactgccgcgttcgtcctcaccatgctgagccgcatcaatccggacctc
cagtctactcaggccatctgcatcgcgccctcccgcgagctcgcgcgccaaatcatgagc
gtcgtcaccctcatgggaaagttcaccaagatcacgactgaattcgcgatcaaggacgac
aacggaccgcccacgaagcacaaggtcaacgcgcacctcgtcgtgggtacaccggggacg
atggcgacgtacctgcagaagcggatcatcaacaaggacacggtcaaggtcttcgtcgtc
gacgaggcagaccagatgatcgcgcaggatgggctcggcgaccacaccacccgggtgaag
aacctcctcggctcccccggccagcccggcaacctccgctaccaaaccatcctcttttcc
gcgaccttcaacgacaacgtgcgcgggttcgctgacaggttcgcgccgcacgcgaacaag
atcgagctcaagaaggaggaggtaaatgtggggacgatcaagcagttcttcctggactgc
gtgagcaagcaggacaaatacgacaagctggtgatgttgtataacatcttgacggttggg
cagagtatcattttctgtcagtaccggcaagaggcagaccaaattgcgcagcggatgatc
aaggaggggcacaaagtcgcggcgttgcacggtgcgaaggacggctcggagcgagatcag
atcatcgacaggttccgcgagggacacgaaaaggtcctcatcaccacgaacgtcatcgcg
cgcggcatcgacatcctccaggtcaacatggtcgtcaactacgacctcccgctcatgagc
gagcgcgacaagaaccggtacggctcgaacaacgacaagccggatctggagacgtacatc
cataggataggtcgaacaggtcgctttggccgtcgtggcatctcaatcagcttcgtgcac
gaccagcagtcgtacgacctcctgaaggtgctggaacgcgagatgggccgcgagatccag
gctataccaactaagggcaaggacgaggggcagattgaggactacgtcaaggacctactg
aagaaagataccacagtcggcagcgcgaagtag
DBGET
integrated database retrieval system
