Schizophyllum commune: SCHCO_02747718
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Entry
SCHCO_02747718 CDS
T01331
Symbol
SCHCODRAFT_02747718
Name
(RefSeq) uncharacterized protein
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
scm
Schizophyllum commune
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scm03036
]
SCHCO_02747718 (SCHCODRAFT_02747718)
Chromosome and associated proteins [BR:
scm03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
SCHCO_02747718 (SCHCODRAFT_02747718)
microRNA pathway
RISC loading complex
SCHCO_02747718 (SCHCODRAFT_02747718)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
Helicase_C
DUF7615
Pox_A9
Motif
Other DBs
NCBI-GeneID:
9586123
NCBI-ProteinID:
XP_050200570
LinkDB
All DBs
Position
Unknown
AA seq
1458 aa
AA seq
DB search
MSDSALPPKYAKRRAPVVRDEDIKAAKRRRVAEDSDDGMDVDPEDASGVQDARSQDTAGS
PLKLKTYRKEVLQSALTQNTIALLPSPKQTPKLLKRFLRHLLVDESSSNSAGHVQQDRCI
IFLVKDGGDNPGDAYGLAEVVSQIEEPTTILPLTPQNFLDELSSSAFAITQAQAIIIPEP
QTFNHEATQALEEIIDDFYRPSAPSLRPLILATVVRTSRPWLSFDQQIIALEHLLECKTH
GFTDNLRQAVVPNHPVTEVVYYEPAPQPPDTPLITKLREACSPAPTLCEPYIRRARRILR
DLGPAAANYYLLQAKDDLKLAVIEDAPSKTAREQAVKLLTNEARPNLRASGQLTSKIQQF
LDVVRTEYEQGTDHFRGLAFVCSDHVAHLIAYIANEMYHALQARVITGNVDRTTLVSIFR
DYDMGKTKLLIATESAMDMDFTRASLVVQLDLFDSYASYAYSMAHSSKRLVLLAAQGKPI
HRRTVEGLMQQEDALSKWAKTLTTKSILIPPISSLLEEPSKTRRVLENEEAEKDSVLTCA
ATGGYMNPHDVVKAVCAYAATLHVAHNFTVLETHRTRQTERVGFICTVHLPGSPASEVEG
PVAPSRWEARRAACALACTVLYKHSVIDSRYFRHHRIPGEGALTYSKPTGGAPGTTFARR
KAAFWKISARTPQKEGVYPIVIECVERDGPERYRPLLLLTRHPLPDLPTIRVYEVPNVRE
VRVRRAKPLDLDDAQQDLLARYTERIVRAVLNKELTCASGDMLWTVAPLQAGWRLPSGES
SFDVSSGIDWAGMEASVAELYVPIKRGSPDELATHMEDGVVQGRRSEMTRRYFFMGVRRD
LTPLSKPADSPREALYENIFEFARSASRDLKTLEDFNQPLIEVERIPQAHNCLTLMQGPP
DKGDVPAKYMIPELCFKITIPASVMRTALLLPSVLTRIDEIFLVKELNAIHFNHIIAEDL
LHAALTTPSAGFDRNYERLELYGDAFLKYLASLHLFVMSHHNDSEGKLHAARRPLISNQK
LMECSLALGLPSFVIGKPFVIRFWGPANFRMNPPGGSAEKGKEKEQGKVAETPPPASDAV
GANQGEGGGGKKRRKKKKGEPNDGQIQQMLSDKALADVVEAILGAAHLSAGRDGGLQVAK
ALGLPVAKNADIWDDFKAQVSMHATPSAVSFLRPGTIDGVQSVIGQKLNKPELLALALTH
ANNSSPLGNYERIEFLGDALLDFQVVEYVYRKYTQQPPSVLTLLKSAMVGNSPLAAICAE
SGLYRHLHQKSHQIQQSINTYLTALQKAKQKEYAAADDDLRERGQYWFDVNPPKALSDIV
ESIVGAIYISDDLEWTGVQQLFKHFLQPFYEKHIRMNTLAVHPTKILLELVQSQCCHKLE
LVKSASAGQTQCNVLLHGAVIASKTAVNGVLAARGASSIALNKLDRDPGLVARTCTCRTA
GMGKAERDVDQFLSEFKA
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactcggctctgcctccaaaatacgcgaaaaggcgtgcaccagtcgtccgcgat
gaagacatcaaagccgctaaacgacgccgagtcgcggaggattcggacgatggcatggat
gtcgatcccgaagacgcgtcaggagttcaagatgcgcgatcacaagacactgcggggtcc
ccgctcaagctcaagacctacaggaaagaggtgctccagagtgcccttacccagaacacc
atcgccctcctgccatcgccaaaacagacaccgaaactactcaagcgcttccttcgccat
ttgttagtagatgaatcaagctccaattccgctggccatgttcagcaggacaggtgcatc
atcttcctggtgaaggatggtggtgacaatcctggggatgcatacggactcgcagaagtc
gtatctcaaatcgaagaacctaccacaattcttccgttgacgccgcagaatttcctagac
gagctttcctccagcgcatttgcgatcacccaagcccaagcaattatcatccctgagccg
caaaccttcaatcacgaagcgacgcaagcattggaagagatcatcgacgacttttaccgc
ccgtctgcgccttccctccgacccctcatcctagccaccgtcgtacgaacgtctcgaccc
tggctctcctttgaccagcaaatcatcgccctcgagcacctgctagagtgcaagacccac
gggttcactgataacctgcgccaagcggtcgttccaaatcatccggtcaccgaagtcgtg
tattatgaacctgcgccccagcctcctgataccccgctcatcacgaagttgcgcgaggca
tgtagcccagcgccgactttgtgtgagccgtatatcagacgggcgcggaggatcttgcgc
gacctaggacctgcggcggcgaattactatttattgcaagccaaggatgatttgaaattg
gccgtaatcgaagacgcaccttcaaagaccgcaagagagcaagcggtgaagctcctcaca
aacgaagcaaggcccaatctacgggcttcaggccaattaacatccaagattcagcaattc
ttagacgtcgttcgaactgaatacgaacaaggcactgaccattttcgtggtcttgcgttt
gtctgctctgatcacgtggcccatctcattgcctacatcgcgaatgaaatgtatcatgcg
ctgcaggcaagagttatcacaggcaatgtcgaccgaactacactggtctctattttccgt
gattacgacatgggcaagaccaagctcctcatcgccacggaatcggcgatggatatggac
ttcacgagggcttcgcttgtcgttcagctcgatctgttcgacagctacgcctcatatgcg
tactcgatggcacactctagcaagcgcctagttctgctcgccgcgcaaggaaagcctata
catcgtcgaaccgtcgagggccttatgcagcaggaagatgctttatcgaagtgggccaag
acgctgacgacaaagagcattctaataccaccgatatcttcactgctcgaggaaccatcg
aagacgcggcgtgtactagagaatgaggaggcggaaaaggatagcgtcctcacatgcgct
gcgacaggcgggtacatgaatcctcacgacgtggtcaaggctgtctgtgcctacgcagct
acgctccacgtcgcccataacttcactgtcctggaaactcaccgcactcgtcaaaccgag
cgtgtgggcttcatttgcacggtccatctacctggtagcccggcttcagaggtcgaaggc
cctgtcgcgccatcgcgttgggaagcacgccgcgccgcctgcgcactcgcatgcaccgta
ctctacaaacacagtgtgatcgacagccgctacttccgccaccaccggatccctggcgaa
ggtgcactcacttacagcaagcccacaggcggtgcccccgggacaacgtttgcgcggcgc
aaagcagcattctggaaaattagcgctcgtacgccacaaaaggagggcgtttatcctatc
gtcatcgaatgcgtcgagcgcgacgggccggagcggtatcgcccactgttgctgttgacg
cggcaccccctgccggatttgcctacaatccgtgtgtacgaagtgcccaatgtgcgggag
gtgcgtgtgcggcgagccaagccgctggatttggacgacgcgcaacaggatctgttggcg
cgatatacggagcgtatcgtgcgcgcagtattgaacaaggagcttacgtgcgcctcgggg
gatatgctatggactgtggctccgctgcaggcggggtggcgactgccaagcggggagtca
tccttcgatgtttcgagtggcattgactgggctgggatggaggcgagtgtggcggagctg
tacgtgcccatcaagcggggatcgccggacgagctagcaactcatatggaggacggcgtc
gtgcaagggcgtcggtccgagatgacgcgtcgctactttttcatgggtgttcggagagac
cttacaccgttgagtaagcctgcggacagtccgcgcgaggcgctctacgagaatatcttt
gagttcgctagatccgcgagtcgggatttgaagaccctcgaggacttcaatcagcctctt
atcgaagtggagcgtatcccccaagcacacaattgcttgacgctcatgcaaggaccgcct
gacaagggcgacgtgccagcgaagtacatgataccggaactgtgcttcaagataaccatc
cctgcaagcgttatgcgaacagcgctgcttttaccgtctgtattgacccgaatcgacgaa
atcttcctcgtcaaggagctaaacgctatccacttcaaccacatcatcgccgaagacctc
ctgcacgctgcgcttacgacgccgtccgcgggctttgaccgcaactatgagcgcctcgaa
ctctacggcgatgccttcctgaaatatctcgcctccctgcatctcttcgtgatgagccac
cacaacgacagtgaagggaagctgcacgcggcgcggcgcccactcatcagcaatcagaag
cttatggagtgctcccttgcgctggggcttccctcgttcgttattggcaagccgttcgtc
attaggttctggggaccggcgaacttccgaatgaatcccccaggggggtcggcggagaaa
ggcaaggagaaggaacagggaaaggtcgcagagactcctccgccggcgagtgacgccgtg
ggcgccaatcagggcgagggtggcggcggaaagaagcgtaggaagaaaaagaagggcgag
cccaatgacgggcagatccagcagatgctaagcgacaaggcgctggccgatgtcgtggaa
gccatcctaggcgccgcacacctaagcgccgggcgcgacgggggtctgcaagtggcgaag
gcgctagggcttccagtagcaaagaatgccgacatctgggacgatttcaaggctcaagtg
tctatgcacgcgactccgtctgccgtgtctttcctacgcccagggaccatcgacggcgtg
caatctgtgatcggccagaagctgaacaagccagagcttttggcgcttgctctgacccac
gcaaataattcgagcccgttgggtaattatgaacggatcgaattcctcggtgacgcatta
ctggacttccaggtggtcgagtatgtgtatcgcaaatacacccaacagcctcctagcgtt
ctgacgttactcaagagcgctatggtgggcaattcgcctttagccgccatttgtgcagaa
tcgggcctgtacaggcacttgcaccagaaatcgcatcagatacaacaaagcatcaacacc
tatctcactgcgcttcagaaggccaagcagaaggaatacgcagcagccgatgatgacctc
cgagagcgcggtcagtattggttcgacgtgaatccgccgaaagctctttccgacatcgtg
gagtccatcgtaggggcgatctacatttccgacgatctcgaatggacaggcgtgcagcag
ctcttcaagcattttctgcagccattttacgagaaacacatacgcatgaatacgcttgcc
gtacacccaaccaagatcttactcgaattggttcagagtcaatgttgccacaagctggaa
cttgtcaagagcgcttcagccggtcagacgcaatgcaacgtccttttgcatggtgctgtg
atcgccagcaagacagcggtcaacggcgttctggcagcgaggggggcgtcatcgattgcc
ctcaacaagttggatagagaccccggtttggtcgcgaggacgtgcacctgtcgtacagca
ggaatgggaaaagcggagagggatgtcgatcaattcttgtccgaattcaaagcctga
DBGET
integrated database retrieval system