KEGG   Schizophyllum commune: SCHCO_078716
Entry
SCHCO_078716      CDS       T01331                                 
Symbol
SCHCODRAFT_078716
Name
(RefSeq) WD40 repeat-like protein
  KO
K17908  autophagy-related protein 18
Organism
scm  Schizophyllum commune
Pathway
scm04136  Autophagy - other
scm04138  Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:scm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04138 Autophagy - yeast
    SCHCO_078716 (SCHCODRAFT_078716)
   04136 Autophagy - other
    SCHCO_078716 (SCHCODRAFT_078716)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:scm04131]
    SCHCO_078716 (SCHCODRAFT_078716)
   03029 Mitochondrial biogenesis [BR:scm03029]
    SCHCO_078716 (SCHCODRAFT_078716)
Membrane trafficking [BR:scm04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    SCHCO_078716 (SCHCODRAFT_078716)
Mitochondrial biogenesis [BR:scm03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    SCHCO_078716 (SCHCODRAFT_078716)
SSDB
Motif
Pfam: PROPPIN WD40 WD40_Prp19 WD40_WDHD1_1st BCAS3_WD40 Beta-prop_EML_2 EIF3I WDR55 WD40_CDC20-Fz Beta-prop_HPS5 ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 Beta-prop_IFT140_2nd WD_LRWD1 Beta-prop_WDR35_TULP_N Beta-prop_IFT80_2nd WDR90_beta-prop_4th DUF2674 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 9596912
NCBI-ProteinID: XP_003029031
UniProt: D8QE95
LinkDB
Position
Unknown
AA seq 413 aa
MAEKTNANMLFANFNQDFSCISVGTRKGYQITNCDPFGRVYTQNDGARGIVEMLFCTSLI
ALVGAADQPQSSPRKLQIVNTKRQSMICELLFPSSILAVKLNRKTLVIVLENEIYIYDIS
NMRLLHVIETTPNPEAIVALSPSAEASYLAYPSPLPSPSAPSTSTPTPSTSQTPSSGDVL
LFHTRTLTVANVIAAHKAPIAALAINSTGTLLATASEKGTVIRVWGIPNGERLYQFRRGA
REARIWSMNFNVVGSLLVAASGHGTVHVFRVGGQQGQGQGSSSAGRAASSPPASIDSREG
VPAMDGGYDASSLRRKSLQMTKSISHSVGGYLPGALTEMWEPQRDFAWLRLPGGGGVRCV
AAISGTMPHVMVISSEGYFYSYSIDLENGGECTLMKQYSLLDTSDGDSATLAE
NT seq 1242 nt   +upstreamnt  +downstreamnt
atggcggagaagacgaacgcgaatatgctctttgcgaacttcaaccaagacttctcctgc
atctccgtcggcacgcggaagggctaccagatcacgaactgcgacccgtttggacgcgta
tatacgcagaatgacggtgctcgaggaatcgtcgaaatgctgttctgcacgtccctcatc
gcactcgtgggtgcggcagaccagccccaatcgagcccccggaagctgcagatcgtgaat
acgaagaggcaatccatgatctgcgagcttctcttcccctcttccatccttgccgtcaag
ctcaaccgcaagaccctcgttattgtcctcgagaacgagatctacatctacgacatttct
aatatgcgactacttcatgtgatagagacgacgccgaaccctgaagcgattgttgcactc
tcgccttccgcggaggcgtcctaccttgcctatccttctccgctaccatctccatccgcc
ccttccacatccacgcccacaccctcgacttcgcaaacaccaagctctggcgatgtcctc
ctcttccacacccgcacccttactgttgcgaatgttattgcggcgcacaaggcccccatt
gcggcactcgccataaactcgacgggcacgctgctcgcgaccgcgtccgagaagggcacc
gtcatccgcgtgtggggcatcccgaacggggagcgcctataccagttccgccgcggcgcg
cgcgaggcgcggatatggtccatgaacttcaatgtcgtgggtagcttgttggtcgccgcc
tcggggcacggcactgtgcatgtcttccgggtgggcgggcagcaggggcaagggcagggg
tctagcagtgcaggacgcgcggcgagcagcccgccggcgtcaattgacagccgggagggc
gtcccggctatggatggagggtacgatgcttcgtcgctaaggcggaagagcctgcagatg
acgaagagcatctcgcattcggtgggcggatatttgccgggggcgctcacggagatgtgg
gagccccagcgggactttgcgtggttgaggctgcctggcgggggtggggtgagatgcgtg
gctgcgattagtggaacaatgccgcacgtcatggtcatatcctcagaaggatacttctac
tcgtacagcatcgacctcgagaacggcggcgaatgtacattgatgaaacagtacagcttg
ctggacacgagtgatggggacagcgcaacgctggcggaatga

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