Solitalea canadensis: Solca_0221
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Entry
Solca_0221 CDS
T02084
Name
(GenBank) putative permease
KO
K07091
lipopolysaccharide export system permease protein
Organism
scn
Solitalea canadensis
Pathway
scn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Solca_0221
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scn02000
]
Solca_0221
Transporters [BR:
scn02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
Solca_0221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
PDZ_2
PalH
Motif
Other DBs
NCBI-ProteinID:
AFD05366
UniProt:
H8KNV5
LinkDB
All DBs
Position
271412..272845
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AA seq
477 aa
AA seq
DB search
MKKLHKLIIISYLRPFVATFFIVSFILLMLFLFKYIDELVGKGLEWYTILQLLGYNFAVN
VPLALPLAILLASIMTFGNLGEQYELVAIKASGISLSRAMIPLVVVMVFLSIAAFYFSNI
VMPHSFLKMASLLYDVRQKKAAFNIPEGVFYNDLEGYSIRVNHKDKDGKTLHELMIYDHT
KGNGNMSVIMANKGEMFKSDDGRYLVLNLFDGVRYEESPGDNGYNERQRQTRIRFKEFGL
KFDMSGFNLSRTKEELFKDNYQMLNVRQLMAKEDSLQNLMALKQRNLSLYVKPTFLIYRP
QANFAKLKADTNLKWKNKDIIMNLPKSDRLLTVDDAINSMRNVKSYLTSAKDEDKAQVEI
LRKHMVEFHRKFTLSFACMVLFFIGAPMGAIVRKGGLGLPVVVSILFFLVFHVLSISGEK
FAKQGALAPYQGMWMATIVLVPIGAFLTYKAATDSALFDVEKYQRFFKNLFSKKKEV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcttcataagctcataataatatcgtatttaagacctttcgtagcaaccttc
tttatcgtttcattcatcttattgatgttgtttttatttaaatacatcgatgagttggtt
ggaaagggtttagagtggtacactattcttcagttattgggctataattttgcggttaac
gttccgttagccttgccgttggccatacttttagcctctatcatgacctttggtaacctg
ggcgagcagtatgaactggtagcaattaaggcatccggcatttcattatccagagctatg
attccgttggtagtggtgatggtattcttaagtattgcagctttttatttctccaatatc
gtgatgcctcattcctttcttaaaatggcctcgctactctatgatgtaaggcaaaagaaa
gcagcattcaatattccggagggcgttttttacaatgacctcgaaggatattccattcga
gtgaaccataaagataaagacggcaaaacccttcatgagcttatgatctatgatcatacc
aaaggaaatggcaatatgagcgtaatcatggcgaataaaggggagatgtttaaatctgat
gatggtcgttatttagtgttaaatttgtttgatggggttcgttatgaagaatcgccgggt
gataatggctataatgaacgtcagcgacaaacacgtattcggtttaaggagtttgggttg
aagttcgatatgtcgggctttaatctttccagaacaaaggaagaattatttaaagataac
tatcaaatgctgaatgttcgtcagctaatggcgaaagaagattccctgcaaaacctgatg
gccctaaagcaacgtaacctgagtttgtacgtaaaaccaacctttttaatataccgtccg
caggcaaactttgctaaattaaaagccgataccaaccttaagtggaaaaataaggacatc
ataatgaatttgcctaagtcggatcgcttgctcactgttgatgatgcaataaattcgatg
agaaatgttaaaagctatttaacatcggctaaggatgaagataaggcacaggtagaaatt
ttaagaaagcatatggtcgaatttcaccgtaaatttaccttgtcattcgcttgtatggta
ttgttctttatcggtgcgccaatgggagcaattgtacgtaaaggcggattaggattacct
gttgtagtgtcgatcttgtttttccttgtttttcacgttttatcaatcagtggtgaaaag
tttgcaaaacaaggggctttggctccttatcagggaatgtggatggcaaccattgtattg
gttccaatcggtgcttttttaacctacaaagcggcaacagactctgcgctatttgatgta
gaaaagtatcaacggttttttaagaatctgttctccaaaaagaaagaagtataa
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