Solitalea canadensis: Solca_0278
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Entry
Solca_0278 CDS
T02084
Name
(GenBank) pseudouridylate synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
scn
Solitalea canadensis
Brite
KEGG Orthology (KO) [BR:
scn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scn03016
]
Solca_0278
Enzymes [BR:
scn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Solca_0278
Transfer RNA biogenesis [BR:
scn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Solca_0278
Prokaryotic type
Solca_0278
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
SeleniumBinding
CATSPERE_NTD1
DUF5642
Motif
Other DBs
NCBI-ProteinID:
AFD05422
UniProt:
H8KSW2
LinkDB
All DBs
Position
348522..349337
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AA seq
271 aa
AA seq
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MDEGQQKHRYFIELAYKGTNFHGWQVQPNAISVQEVLNKALSTVLREPIETLGCGRTDTG
VHATNFFAHFDTSIAIVVDHLAKEKPELAMGEFRLVKAVNALIGYEVAVKRFIAVKQDAH
ARFDATSRSYEYHVVFEKDPFKREFSHHVTNKPDVAAMNEAAKVIMTYTDFSCFSKSNTQ
TFTNNCKITRAEWVEQANGLVFHITADRFLRNMVRAIVGTLLEVGKGTLSIDGIRKVIES
KNRSKAGESVPAAGLFLTEITYPEETLKSKS
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggatgagggacaacaaaaacacagatatttcatagagcttgcatacaaaggcactaat
tttcatggttggcaagttcaacccaatgcaattagtgtgcaggaagtattgaataaagca
ttatcgaccgttttacgtgaaccaattgaaacattaggttgtggtagaactgataccggc
gtacacgccactaatttttttgctcatttcgatacttcaatagcaatagtagttgaccat
ttagctaaggaaaaaccggaattggcaatgggtgaattccgattggtaaaggcagtgaat
gcattaattggatatgaagtagccgtaaaaagatttatcgctgtaaaacaggatgcccat
gcccgttttgatgcaacaagccgttcttatgagtatcatgtcgtttttgaaaaagacccg
tttaaaagagagttctcccatcatgttaccaataaacctgatgttgctgcaatgaacgaa
gcggcaaaagtcatcatgacttataccgactttagctgtttcagtaaaagtaatacccaa
acgtttaccaataactgcaagataactcgggcagaatgggttgaacaggcaaatggatta
gtttttcacattacagccgatcgttttctacgcaatatggtacgggcaattgtaggaacg
ctcttggaagtaggaaaaggtaccctttccatcgatggaattagaaaagtgatcgaaagt
aaaaatcgctcaaaagcaggtgaatcagtgcctgcagcgggattgtttttgaccgagata
acctatcccgaagaaactttaaagtctaaaagctaa
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