Solitalea canadensis: Solca_0307
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Entry
Solca_0307 CDS
T02084
Name
(GenBank) RagB/SusD family protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
scn
Solitalea canadensis
Brite
KEGG Orthology (KO) [BR:
scn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scn02000
]
Solca_0307
Transporters [BR:
scn02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Solca_0307
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
AFD05450
UniProt:
H8KSZ0
LinkDB
All DBs
Position
382102..383619
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AA seq
505 aa
AA seq
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MKISNIKYILLGTTLLTLASCGNDFLDQPISGKLSKDEFYKTDQDASQALIAVYDMSGAD
YYQAWSSKYMVKEMPSDDSNAGGSNAGDQPGYQSLDKMATLDPTNGNVGLTWKISYFTIY
RANLVINKVQAETNVRKRIIAEAKALRAFTYFDLVALWGDVPLILNEVDPANYTTITRAP
KADVYAQIEKDLTEAIADLPLKSEYSAADKFRFSKGAAQALLGKVYLFEEKWPEAVTQFE
SVISSGQYGLEVSVAKVFSPSGEFGKESLFESSFVSSEKYGWGNFPWGSQPESNIHVQLM
GPRSDFYTKAPADSLLGGWGFNTPKKKLYDAFVAAGDSARRVNTIMSDVELKKAGGDWTA
PNAYDYEGYFQRKYGTFQQQTGPEANELNYSTNFRLIRYADVLLMAAEAQYRNGNPGKSQ
QYLNMVRNRSKLASITPSGTDLFNAIVRERQLELAFEGFRFLDLVRWGMAPTELADEGFV
AGKNEVLPIPINEVRTAGLVQNPKY
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttcaaatatcaagtatatattattaggcacaaccttgctaacattggcaagt
tgtggtaatgatttcctggatcagcctatttcaggaaaactttctaaagatgaattctat
aaaacggatcaggatgcgagtcaggctttaatagctgtttatgatatgtctggagcagat
tattatcaggcttggagtagtaagtacatggttaaagagatgccttctgacgatagtaat
gcaggtggtagtaacgcgggcgaccagcctggttatcagtcattggataaaatggcaacg
cttgatccaacgaatggaaacgttggattaacatggaagatctcttatttcaccatttac
cgtgcaaaccttgtaattaacaaagttcaagctgaaaccaatgttcgtaaacgcatcatt
gcggaagctaaagcgttaagagcatttacttatttcgacttggttgcattatggggtgat
gttccattgattttgaatgaagttgatcctgctaactacaccacgatcacgcgtgctcct
aaagctgatgtttatgctcaaattgagaaagatttaacagaagctattgctgatcttcca
ttaaaaagtgagtacagcgcagcagataaattcagattttcaaaaggtgcagctcaggct
ttattgggtaaggtgtatttgttcgaggaaaaatggcctgaagccgttactcaatttgag
agtgtgatcagttctggacaatatggcttagaagtatctgtagcgaaagtattttctcca
tctggtgaattcggtaaagaatcattatttgaatcttcatttgtttcatcagaaaaatat
ggatggggtaattttccttggggatctcaaccagaaagtaatatccatgttcagttaatg
ggtccaagaagtgacttctatacaaaagcacctgcagattcactacttggtggatggggg
ttcaatacacctaagaaaaagttgtatgatgcatttgttgccgctggtgatagtgcaaga
agagtgaataccattatgtcggatgttgagttgaaaaaagcaggtggcgactggaccgct
cctaatgcttatgattatgaaggatatttccaacgcaaatacggtacattccagcagcaa
actggtcccgaagctaatgagctaaactatagtaccaacttccgattgatcagatatgct
gacgtattattaatggctgcagaagctcaatacagaaatggtaatcctggtaaatctcag
caatatttaaatatggtgagaaatcgttcgaaattagcatcaattactccttctggaact
gatctattcaatgcaattgtaagagagcgccagctggaattagcctttgaaggtttccgt
tttcttgatcttgtacgttggggaatggctccaacagagcttgccgatgaaggttttgtt
gcagggaaaaatgaagtgctaccaattcctattaatgaggttagaacagccggattagta
caaaatcctaaatactag
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