Solitalea canadensis: Solca_1117
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Entry
Solca_1117 CDS
T02084
Name
(GenBank) ATPase involved in DNA repair
KO
K03546
DNA repair protein SbcC/Rad50
Organism
scn
Solitalea canadensis
Brite
KEGG Orthology (KO) [BR:
scn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scn03400
]
Solca_1117
DNA repair and recombination proteins [BR:
scn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Solca_1117
Archaeal homologous recombinant proteins
Solca_1117
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
HH_AprE
GTP_EFTU
Fibulin_C
Motif
Other DBs
NCBI-ProteinID:
AFD06223
UniProt:
H8KQ55
LinkDB
All DBs
Position
complement(1332780..1335860)
Genome browser
AA seq
1026 aa
AA seq
DB search
MLPVRLTLKGIYSYRDADEHVVDFEKLTQDHLFGIFGAVGSGKSTILEAITFALYGDIER
MNNRENRSYNMMNMRSNSMLIDFQFKAGIEQLLYRFTVKSKRSTKNFQLVPTPERQAYQW
KNNDWEPLESADASKVIGISYENFKRTVIIPQGKFQEFIQLGPAERTKMMKELFNLDKFD
YAQTTREKIYKVKAQLTYLEGELTGLGSISEEELQEKENQLTVLSAEKEKIELEKKQKEL
VLKELVELKQRLEELTLRGKELSLLVDQQSTIVQKEKDLLHFERTKERYLAIVEEQTRLQ
HELNNLNDQLKINQQKQEIHKQELSQLTAREAVLKQTLDNKDQQLKKAAELVAIAQLKEL
RTNEQVLQERISKGEALIHNKQQEVEGLKDKKDSLLANRSKLNERKPNHELLANLTDWFG
KHLQLSADLSNINSQLAQRKAERAYLTETFAQKLAVHKLEFPLEIEPFKTSLQNEIKKLD
THKTSVLSQQLEVKSFEKLAEFAQNLLEGDNCPLCGSTHHPNLYASHHSTEALASMDTDL
KTIDNQIKSLNALIIETNGYQQGTEHIISQENEIALVVDEKEKAVTLHKQSFNYDNFSPD
RPEQINEMRASIKDWELQRDQIDKEQTLLDQQFNLANEDLKKYENGVIKLKNDLAESKGA
INTLVSNLDVLNESDFESKTAEELKNESRFLIDRLNDAQQELDALIKRSEVKSREINQFA
GAIENISGQITSIKVLLVEKQESFSGLLKSDNLSEDEVLKTLLKNIDIASFRIEISEFKK
NIAVAEERVKNIEQSIAQKTYNEMLYLQLETELGTLSDLLNHTSAQFAELKVSIENGKKA
LARISQLVKDKQQLEDRKSQLDILDRLFKANGFERFISVVYLRNLCFAANERFMKFSRNQ
LSLELNEETESFIIRDNLNNGQVRSVKTLSGGQTFQAALSLALALADNIQQFNQGNQNFF
FLDEGFGSLDKDSLHHVFETLKSLRKENRIVGLISHVDDMQQEIATYLQVKNTEEYGSII
SASWEE
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgcttccggtacgattaacattaaaaggcatttattcatatagagacgcagatgaacat
gtggtagattttgaaaaattaactcaagatcatttgttcggcattttcggtgcagtggga
agtggaaagtcaaccattttagaggccattacttttgctctttatggagatattgaacgg
atgaacaatcgggaaaaccgttcctataacatgatgaacatgcgttctaattccatgtta
atcgattttcagtttaaagcgggaattgaacagctattgtatcgttttactgtaaaaagt
aaacgaagtaccaaaaactttcaacttgtacccactcctgaacgacaagcttaccaatgg
aaaaataacgactgggaaccacttgaatctgctgatgcatcaaaagtgattggtatttct
tatgagaattttaaacgtacggtgataattccacaaggaaagttccaggagtttatccag
ttgggtccggccgagcggaccaaaatgatgaaggagcttttcaatctcgataaatttgat
tatgcgcaaacaactagagagaagatctataaagttaaggcacaattaacctatttagag
ggtgaacttactggcttaggttccatttctgaagaagaattgcaagaaaaagagaatcaa
cttactgttctatctgccgaaaaggaaaagattgagttggagaaaaaacaaaaagagtta
gtactgaaagagcttgttgaacttaaacaacgattggaagagctgactcttagaggaaaa
gagctttcattattagtcgatcaacaaagtacaatagttcaaaaagaaaaagatttactg
catttcgaacgtacaaaagaacgttaccttgctattgttgaagagcaaacacgcttacag
catgaactgaacaaccttaatgaccagctaaaaatcaatcaacaaaaacaagaaattcat
aaacaagaattatctcaattaacagcaagagaagctgttttaaaacaaactttagacaat
aaagatcagcagctcaaaaaggccgctgaattagtagcgattgcccagctaaaagaatta
agaaccaatgaacaagtacttcaggaacgaatttcaaagggtgaagctcttattcataat
aagcagcaagaagttgaggggctgaaagacaaaaaagactccttattagcgaatcgctct
aagttaaacgaacgaaaacctaatcatgaattacttgccaatttaaccgattggttcggt
aaacatctacagctatcagctgaccttagtaatatcaactcacaacttgcacagcgaaaa
gccgaaagagcctatttgactgaaacttttgcacaaaagctagctgttcataaattggaa
ttcccattggagattgaaccgtttaagacttctcttcaaaatgaaattaaaaaactagac
acgcataaaacatcagtactgagccaacagctcgaagttaaaagttttgaaaaactggct
gagtttgcccaaaatttgctagaaggagataattgtccactttgtggatctactcatcat
ccgaatttatatgcttcacatcatagtaccgaggctttggcatcgatggatactgatttg
aaaacaattgacaatcaaatcaaatcattaaatgcgttaataattgagacaaatggctat
caacagggcacagagcatatcatttctcaggaaaatgaaattgccttggttgttgatgag
aaagaaaaagcagtaacgctacataagcaatcttttaattatgataatttctcacctgat
agacctgaacaaataaatgaaatgagagcctctatcaaagattgggaactgcaaagggac
caaattgataaagagcagactctactcgatcaacaatttaacctggctaacgaggattta
aaaaaatatgaaaatggggttataaaactcaagaacgatctagctgaaagtaagggtgca
atcaatacattggttagcaatcttgatgttctaaatgaaagtgattttgaatctaaaaca
gcagaagaactaaaaaatgagtctagatttctaatagataggttaaatgatgctcaacaa
gaactagatgctctaatcaaacggtcagaagtaaaaagcagagagattaatcaatttgca
ggtgctatagaaaacattagtggacaaattacaagtatcaaagttttacttgtcgaaaaa
caggaaagcttttcaggtttattaaagtcggataacttatcggaggatgaggtactaaaa
acactattaaaaaatattgatatagcgtcatttagaattgaaataagtgagtttaaaaaa
aatattgcagttgctgaagaacgtgtaaaaaacattgaacagtcaatagctcaaaaaact
tacaatgaaatgttgtatttacagcttgagacagaattaggtactttatcggatctgtta
aatcatacctctgctcagtttgcggaacttaaagtgagtattgaaaatggcaaaaaagcg
cttgcccgtatttctcaactagtaaaagataaacaacagcttgaagaccgaaaatctcaa
ttggacatccttgatcgtttatttaaagctaatggttttgaacgctttatctcggttgta
tacctccgaaacttatgttttgccgctaatgaacgatttatgaaatttagccgaaaccag
ctgtcgcttgaacttaatgaagaaacggaaagttttatcataagggacaatctaaataat
ggtcaggttcgttctgtaaaaaccctttcaggtggacaaacatttcaggcggcattatcg
cttgcattagctttagctgataacattcaacaatttaaccagggtaatcaaaatttcttt
ttcctggatgaaggcttcggttctttggacaaagattcattgcatcatgtattcgaaact
ctgaaatcgctccgtaaagaaaatcgaattgttggcttaatatctcacgtcgatgatatg
caacaagaaattgctacttatctccaggttaaaaacactgaagaatacggcagtattatt
tcagccagctgggaggagtag
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