Solitalea canadensis: Solca_1248
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Entry
Solca_1248 CDS
T02084
Name
(GenBank) topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
scn
Solitalea canadensis
Brite
KEGG Orthology (KO) [BR:
scn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scn03032
]
Solca_1248
03400 DNA repair and recombination proteins [BR:
scn03400
]
Solca_1248
Enzymes [BR:
scn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Solca_1248
DNA replication proteins [BR:
scn03032
]
Prokaryotic type
DNA Topoisomerases
Solca_1248
DNA repair and recombination proteins [BR:
scn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Solca_1248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AFD06342
UniProt:
H8KVG2
LinkDB
All DBs
Position
complement(1501047..1502105)
Genome browser
AA seq
352 aa
AA seq
DB search
MKKELSDLRAEARQMKLIYVTDKTIGYSRLLVKNAVTFFDCDGHEITDEDTLKRLRGLVL
PPAWQNVWICTKPNGHLQATGFDKLGRKQYRYHTNWSLIRNEKKHDRMLEFGVAIPQLRK
QLEKDLRKKQLSKEKVIALALSLLEHTFIRIGNDAYAKKYNSHGLTTLRNKHIKINGSKF
RLSFTGKKGIIQDIEVSHLRLAKLMKKLRDLPGQELFQYLEADGSRNSIDSGMVNDYIRQ
YTGNDFTAKDFRTWAGTVNALVYLSGKKPFESATEAKRNINEALDFVALQLGNTRTVCKK
YYVHPALLGAYEEGRLFIYLKKLSNLNEGSVKSKMQKTEERVLLNFLRKEGR
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagagttaagcgatcttcgggcagaagctcgtcaaatgaagttgatctatgta
actgataaaactatcgggtatagccggttattggtaaaaaacgctgtcactttttttgac
tgtgacggacatgaaataactgatgaagatacacttaagcgcttacgtgggttagttttg
ccgcctgcctggcaaaacgtatggatttgcaccaaacctaatggtcatttgcaggctacc
ggatttgacaaattaggaagaaaacaatatcgttatcataccaattggtcgctaatcaga
aatgagaagaaacacgaccgaatgcttgagtttggcgttgcaattccacagttaagaaaa
caactcgagaaagatcttcgcaaaaaacagttatcaaaagaaaaagtgattgcacttgct
ttaagcctattggagcacacttttatcagaattggcaatgatgcttatgcgaaaaagtat
aacagccacggtttaactacgctacgaaataaacatattaaaataaacggaagtaaattc
aggctttccttcacaggcaaaaaaggtattatacaagacattgaagtaagtcatttacgg
cttgctaaattgatgaaaaaattacgtgatctgcccggacaagaacttttccaatatctc
gaagctgatggttccagaaattcaatcgattccggaatggttaatgattacatccggcaa
tacaccggcaatgattttacggcaaaggattttagaacatgggccggaaccgttaatgcc
ttggtctatctttccggcaaaaagccatttgaatcggctactgaagcaaaaagaaatatt
aatgaagcattagattttgtagcgctccaattaggaaatacccgaactgtttgtaagaaa
tattatgttcatccggcattgcttggtgcttatgaagaaggaaggttatttatttactta
aagaagctttcgaacttaaatgaaggcagtgtaaaatctaaaatgcaaaaaaccgaagaa
cgggtgttactcaactttttacgaaaggaaggcaggtga
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