Solitalea canadensis: Solca_1342
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Entry
Solca_1342 CDS
T02084
Name
(GenBank) DNA polymerase III epsilon subunit-like 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
scn
Solitalea canadensis
Pathway
scn03030
DNA replication
scn03430
Mismatch repair
scn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Solca_1342
03430 Mismatch repair
Solca_1342
03440 Homologous recombination
Solca_1342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scn03032
]
Solca_1342
03400 DNA repair and recombination proteins [BR:
scn03400
]
Solca_1342
Enzymes [BR:
scn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Solca_1342
DNA replication proteins [BR:
scn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Solca_1342
DNA repair and recombination proteins [BR:
scn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Solca_1342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AFD06429
UniProt:
H8KTH1
LinkDB
All DBs
Position
1614203..1615015
Genome browser
AA seq
270 aa
AA seq
DB search
MNLNLKRPIAFFDLETTGVNVASDRIVEIAILKVLPNGTIETKTRRVNPEMPIPLESSLI
HGIYEEDIKNEPTFKQMAKSIAQFLENADLGGYNSNKFDVPLLMEEFLRAGVEFDIEGRK
LVDVQNIFHQMEQRTLKAAYKFYCGKEIENHHSAEADIKATYEVLLAQLDKYDGVEYEDK
SGNKSTPIVNDVEALHKFTYVRDVVDFAGRMIYNEQGVEVFNFGKHKGKAVEEVFSFEPT
YYDWMMNGDFPLYTKKKLTEIRLRSAFKKR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaacctgaaaagacctattgcattttttgatcttgagactaccggtgttaat
gttgcatctgatcgtatagtggaaattgcaatactaaaggtgcttcctaacggaacaatc
gaaaccaaaacccgccgtgttaaccctgaaatgcccattccacttgaatcttcattaatt
catggcatttatgaggaggatataaagaatgagcctacttttaaacaaatggctaaaagt
atagctcaatttcttgaaaacgctgatctgggagggtataactctaataaatttgatgta
ccgttgttaatggaagagtttttaagagcaggagtggagtttgatattgaaggacgtaaa
cttgtagatgttcaaaatatcttccatcagatggaacaacgtaccttaaaggctgcttat
aaattctactgtggtaaagagatcgaaaatcatcattcggccgaagcagatataaaagca
acgtatgaagtgcttcttgctcaattagataaatacgatggtgtagaatatgaagataaa
tcaggtaataaatctacgccaatagtaaacgatgtagaagctctacataaattcacctac
gttcgtgatgttgtcgactttgcgggtagaatgatttacaacgagcaaggtgtcgaagta
ttcaacttcggtaagcacaaaggaaaagctgttgaagaggtgttttcttttgaaccaact
tattacgattggatgatgaatggtgattttccactatatactaagaagaagttaacagaa
atccgtttaaggagtgcgtttaagaagagatag
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