Solitalea canadensis: Solca_2237
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Entry
Solca_2237 CDS
T02084
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
scn
Solitalea canadensis
Pathway
scn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Solca_2237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scn03400
]
Solca_2237
DNA repair and recombination proteins [BR:
scn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Solca_2237
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
ATPase_2
FtsX_ECD
AAA_14
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFD07280
UniProt:
H8KR74
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Position
complement(2636382..2639006)
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AA seq
874 aa
AA seq
DB search
MAKGKDGKETPLMAQYNQIKTKYPGAILLFRVGDFYETFGDDAVKSANILGITLTKRANG
SASHIELAGFPHHSLDTYLPKLVRAGQRVAICDQLEDPKTVKTIVKRGVTELVSPGVAYN
ENILNNKANNYLAAVYFDKDALGIALLDISTGEFLTAQGEADYIDKLLQSFRPTEVIFSK
SKSRDFVSQFGDKFYTYAVDDWVFGYDYANETLLKHFGTVSLKGFGIENLHHGIVAAGAC
LHYIFEAEHRNVQHIAQISRIEEDRYVWLDRFTIRNLELIFSPNEGATPLISILDQTATP
MGARLLRKWMVMPLKEKVLIVERLSVVQHFFEQQELASDIQAKLKPIGDLERLISKVALQ
KANPRELVQLGRALAAIAEIKSVTENTKQESLQKIADQLNPCKLIREKIENQLNPEPPVL
VQKGGVIADGICEELDQLRKIAFSGKDYLLDMQRRESDATGIPSLKIAFNNVFGYYLEVT
NAHKDKVPEEWIRKQTLVNAERYITPELKEYEEKILGAEEKIFALENKLYNDLLMGMLEY
IRPIQLNALLVAQLDVQLSFAQVAVKNHYSKPEIVDDNVIDIKAGRHPVIEKSLPLGEEY
IPNDVFLDDETQQIIMITGPNMAGKSALLRQTALIVLMAQVGSFVPAKAARLGITDKIFT
RVGASDNLSSGESTFMVEMNETASILNNLSNRSLVLLDEIGRGTSTYDGISIAWSIAEYI
HNDPKSKAKTLFATHYHELNEMENEFERIKNFNVSIKEVDNKVIFLRKLVAGGSEHSFGI
HVARMAGMPPKVVKKAEEVLRKLEEERSSESGTGAAIKNGVKKLKKSDQMQLNIFSLDDP
ILIKIRDSLTDLDVNVLTPVEALLKINEIQKLIK
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaaggtaaagacggaaaagaaacgcctctaatggcgcagtataaccagataaag
acaaaatatccgggagcaattctgttgttcagggtaggcgatttttatgagacgtttgga
gatgatgcggtaaaatcggccaatatactgggtataacgcttacaaaaagggccaatggt
tcagcctctcatattgaattagcaggatttcctcatcattcattagatacttatttaccg
aaactggttcgggcgggacagcgtgttgccatttgtgaccagttagaagatcctaaaacg
gttaaaacaattgttaagcgtggggtaactgaattagtttctcccggtgttgcttacaat
gaaaatattcttaataataaagctaataactacctagctgctgtctattttgataaagat
gcgttaggcattgcactgttggatatttctaccggtgagtttttaactgctcaaggtgaa
gctgattatattgataaattgctccaaagtttcagacctacggaagttattttttcaaaa
agcaaaagccgcgattttgtaagtcagtttggggataaattctatacttacgctgttgac
gattgggttttcggttatgattatgcgaatgaaaccctattaaaacattttggtactgtt
tctttgaaaggattcggtattgaaaacctacatcatggtattgttgctgcaggagcatgt
ttacactacatttttgaagccgagcatcgcaatgttcaacatattgcccaaatttcgcgt
attgaagaagatcgctatgtttggctggatcgttttactattcgtaatctcgagcttatt
ttttctccaaatgagggagcaactccgttaatttctattttggatcaaacagcaacgccg
atgggggcacgtttgctccgaaaatggatggtgatgccattgaaagaaaaggtgttaatt
gtagaacgtttaagtgttgttcagcatttctttgaacaacaggagcttgcgtcagatatt
caagccaaactaaaacctatcggtgatctggaacgtctgatttctaaagtggcattgcaa
aaagctaatccacgtgaattggttcagttgggaagagcgttggcggctattgctgaaatt
aaatcggtaacagagaataccaaacaggaaagtctgcagaaaatcgctgatcagctgaat
ccatgtaagcttattcgtgaaaaaatagaaaatcagctgaatcctgaacctccggtttta
gtgcaaaagggtggtgtaattgctgacggcatatgtgaggaactggatcagttacgcaag
attgcgttcagtggaaaagattacttgctggatatgcagcgtcgtgaaagtgatgcaact
ggaattccttcccttaaaatcgcttttaataatgtttttggttattaccttgaagtaacc
aacgctcataaagataaagtcccggaggaatggatccgtaaacaaacgctggtaaatgcc
gagcgttatattacccctgaactgaaggaatatgaagagaaaattttgggtgctgaagaa
aagatctttgctcttgaaaataagctctataatgatttgttgatgggtatgttggagtat
atccgtccaattcagctgaatgccttgttagttgcccaactggatgtgcaactgagtttc
gcgcaggttgctgtaaaaaatcattacagtaagcctgaaattgtggatgataatgtgatc
gacattaaggcgggccgacatccggttattgaaaaaagtttgcctttaggcgaggagtat
attccgaacgatgtgttcttggatgatgaaacacagcagatcatcatgataacggggcca
aacatggcgggtaagtccgctttgttaagacaaacggcacttattgtactgatggcgcaa
gtcggaagttttgttcctgcgaaagctgcccgtttgggtataactgataagatttttaca
agggtaggagcatccgacaacctttcttccggtgagtcgactttcatggtcgaaatgaac
gaaacggctagtatcctgaataacttatcgaaccggagtttagtattactggacgagatc
ggtaggggtaccagtacttacgatggtatttcaatcgcctggtcaatcgcggaatacatc
cataatgatcctaaatcgaaagctaaaacattgtttgccactcactaccatgagcttaac
gaaatggagaatgagtttgagcgaatcaagaacttcaacgtttctattaaagaagttgac
aataaagtcattttcctacgcaaattagttgcgggcggaagtgaacatagtttcggtatt
catgtggcccgtatggctgggatgcctccaaaagtggtaaagaaagcggaagaagtttta
cgaaaactggaagaggagcgtagttcagaaagtggtacaggtgcagctataaagaacggt
gttaagaagctaaagaaatccgatcaaatgcagctgaacatcttttcactggatgatcct
atcctaattaaaatacgtgactctttaacagacctggatgttaacgtacttactcctgta
gaggcgttattgaaaataaatgagatacaaaaattgataaaatag
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