Solitalea canadensis: Solca_2522
Help
Entry
Solca_2522 CDS
T02084
Name
(GenBank) PIF1 helicase
Organism
scn
Solitalea canadensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
HTH_40
AAA_30
AAA_19
Herpes_Helicase
AAA_22
UvrD_C_2
NPHP3_N
AAA_16
AAA_24
Sigma54_activat
TsaE
ORC-CDC6-like
AAA_5
Sigma54_activ_2
nSTAND3
DEAD
NACHT
HerA_C
AAA_7
ResIII
NTPase_1
ABC_tran
AAA_18
COG2p_C
AAA
DUF6115
Motif
Other DBs
NCBI-ProteinID:
AFD07557
UniProt:
H8KUS3
LinkDB
All DBs
Position
complement(3002830..3005037)
Genome browser
AA seq
735 aa
AA seq
DB search
MYDHQNSTFKLAVQFVNQTNRHLFLTGKAGTGKTTFLRYIHDHTSKKTIIVAPTGVAAIN
AGGVTIHSFFQLPFGAFLPVNKPFWGSENGQFHTIHSFLKNAKVSRERRELIQEMELLII
DEVSMVRADLLDTIDAALRHIRKNPQPFGGVQVLYIGDLFQLPPVVKDGEWATLRQYYKT
PFFFDARVIEQTAPLYLELTKIYRQKDHVFIDILNNIRNSIVLQSDLDLLHKYYKPDFKA
PREENYITLTSHTAKADTINRTELEQLSGEIRTFKAEIIGDFGEKSFPAEEALELKENAQ
IMFIRNDKGDNRRYYNGKLATVKSIAAESIVVQFADGTDIELEKESWKNIKYQFNNDDDS
FEEKIIGEFKQYPVRLAWAITIHKSQGLTFEKAVIDAGASFASGQVYVALSRLTNMEGMV
LLSPIKPGSITADRSVLEFCKSGVEERLLEEQFKEDRKQFVHSLLVKTFEWAKVTDRLEY
HYNDFARGLVPDKSEAASLAEKWYRISVEQKNTADKFIAQLNNLIAEAQSAGYERLKERI
DKAEQYFNTSLDEIISTLGDHINVTRKKKRTTKYVKTLKELEVFLIRKAELIKAAQRIAH
GLASGEETEELIEAAQVKHPVKVEPEPETPEKKKKGDSHRISLELYKNGKAITEIASERE
MAESTIEGHLASFIATGEITIEELVAAEKLPVILNAINEVGSNSLGVLKEKLGADFSYAD
IKAVLAYHKTRSSTT
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtacgatcatcagaattccacttttaaacttgctgttcaatttgtaaatcaaaccaac
agacatttatttttaacgggaaaggcggggacaggtaaaaccacctttctgcgctatatt
catgatcatacatccaaaaaaaccattattgtggcacctacaggagttgctgccattaat
gccggtggtgtaaccattcattctttttttcagttgccatttggggctttccttccggta
aataaacctttttggggtagtgagaatggccagtttcatacgattcattcctttttgaaa
aatgcaaaagtgagcagagagcgaagggaattgattcaggaaatggaattactgatcatt
gatgaggtaagtatggttagagctgatttgcttgataccattgatgctgctttacgtcat
atccgaaagaaccctcaaccctttggtggtgtgcaggtattgtacattggtgacttattt
cagcttccgccggtggtaaaagacggtgaatgggcaacattgagacaatactataaaaca
cccttcttttttgacgcaagggtaattgagcaaacagccccgctttatcttgagcttacc
aagatttaccgtcaaaaggatcatgtttttattgatattctgaacaatatccgaaatagt
attgtattgcagtctgatctggatctattgcacaaatactacaaacctgattttaaagca
cccagagaagaaaattatattacgttaacttctcatacggccaaagcagatacaatcaac
cggactgaattggagcaattatcaggagaaatccggactttcaaagctgaaattattggc
gatttcggagaaaagtcatttcctgctgaagaagccctggagttgaaagaaaatgcgcag
attatgtttatcagaaatgataaaggagataatcgacgatattacaacgggaaattagca
actgttaaaagtattgctgcagaaagtatcgttgttcagtttgccgacggaacggatatt
gagttggagaaagagagttggaagaatattaaataccagttcaataatgacgatgatagt
tttgaagaaaagataataggtgagtttaaacaataccctgtgcggttagcgtgggcaatt
accattcataagagtcagggattaacatttgaaaaagcagttattgatgcaggcgcctct
tttgcttccggccaggtgtatgttgcattgagtaggcttaccaatatggaaggaatggtt
ttattatcacctataaagcctggttccataactgccgatcgttcggtattggagttttgt
aaaagtggcgttgaagaaagattgctggaagaacaatttaaagaagaccggaaacagttt
gttcatagtctgttagtaaagacttttgaatgggcaaaagtgactgatcgattggaatat
cattataatgattttgccaggggattagttccagataagtcggaggcggcatccctagcc
gaaaagtggtaccgaataagtgttgaacagaaaaatacggcggataaatttatcgcccaa
ttgaataatttgattgccgaagcacaatcggcaggttatgagcgattaaaagagcgaatt
gacaaggctgaacagtatttcaatacttcattggatgagatcatctccacactcggagat
catattaatgttacccggaagaaaaagcgtacgacaaagtatgtgaaaacgctaaaggag
ctggaggtgtttctaataagaaaagctgaattgatcaaagctgcccaacgcattgcacat
ggtttagcttcaggcgaggaaactgaagagttgattgaagcggctcaagtgaagcatccg
gttaaagttgagccggagcctgaaactcctgagaaaaagaaaaagggtgattcacatcgc
ataagtctggagctgtataaaaacggaaaagcaataacagaaatagcctcagaacgcgaa
atggctgaaagcacgatagaagggcatcttgcttcttttattgcaacaggagaaataacc
atagaagaattggtggcggcagaaaagcttcccgtcatattaaatgcaattaatgaagtc
ggaagtaattcgttaggagtattaaaagagaagttaggagccgatttttcttatgctgat
attaaagctgtacttgcctatcataaaacacgttcgtcaacaacctaa
DBGET
integrated database retrieval system
