Solitalea canadensis: Solca_2879
Help
Entry
Solca_2879 CDS
T02084
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
scn
Solitalea canadensis
Brite
KEGG Orthology (KO) [BR:
scn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scn03009
]
Solca_2879
Enzymes [BR:
scn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Solca_2879
Ribosome biogenesis [BR:
scn03009
]
Prokaryotic type
ribosomal protein modification factors
Solca_2879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AFD07902
UniProt:
H8KWB0
LinkDB
All DBs
Position
3403657..3404988
Genome browser
AA seq
443 aa
AA seq
DB search
MRTKSLKSEIKAQPKVNVITLGCSKNIVDSEVLMGQLKGNSFDVVHESEKVGKDDIVIIN
TCGFIDNAKQESIDTILQFSDLKEKGKVGKVIVTGCLSERYKPELEAEITNVDAFYGTND
LKQMLSNLGADYKHELIGERLLTTPKHFAFFKIAEGCNRPCSFCAIPLMRGMHVSKPIDE
LVKEAKTLAKNGTKELVLIAQDLTYYGLDLYNERKLADLLRNLSDVNGIEWIRLQYAYPS
QFPMDILDVMNERENICNYLDMPLQHITDNMLKSMRRGISKRRTIELVDQIRQRVPDIAL
RTTLISGYPGETQQDHDELLAFVEQTRFDRLGVFTYSHEEKTHAHTLEDDVNEEVKQERL
EEIMDIQQGISFEKNQERLNKTYKVLIDKKDGDYFVGRTEYDSPEVDNEVLIDAREHYVT
VGDFCKVKIDRAEDFDLYGTPVK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaaaatcattaaaatctgaaattaaagcacaacccaaagtaaatgtaattacc
cttggttgttctaaaaatattgtggattctgaagtgttgatgggccagctgaaaggcaat
agctttgatgtagttcacgaatcagaaaaagtgggtaaggatgatatcgttatcataaat
acttgtggttttattgataatgccaaacaggaatctattgataccattttgcagttcagt
gacctgaaagaaaaaggcaaagttggcaaggtgatcgttaccgggtgtttatcagaacga
tacaaacctgagctggaagctgaaattacaaacgttgatgccttttatggcacaaatgat
ttgaagcaaatgcttagcaacttaggtgctgattacaagcatgagctgataggagaacgt
ttgcttactactccaaaacactttgcgttctttaaaattgctgaaggctgtaaccgccct
tgttcattctgtgctattcctttaatgcgtggtatgcacgtatcgaagccaattgatgaa
ttggtgaaagaagcgaaaacactagcaaaaaatggaacgaaagagctggttctaatagct
caggatcttacctattacggcctcgacctctacaacgagcgtaagctggctgatttactt
cgtaatttatccgatgtaaatggtattgaatggatccgcttacaatatgcctatccttca
cagttcccgatggacatacttgatgtgatgaatgaacgcgaaaacatttgtaactatctt
gatatgcctcttcagcacattaccgataacatgttgaagtcgatgcgcaggggaatatct
aagcgcagaaccattgagttggtagatcaaattcgccagcgtgtacctgatattgcatta
cgtaccacattgatctctggttaccctggtgaaacacaacaagaccatgatgaattattg
gcttttgttgagcaaactcgtttcgaccgtttaggtgttttcacctactcccatgaagag
aaaactcatgcccatacgctggaagatgatgtaaatgaggaagttaaacaagaacgactg
gaggagatcatggatattcaacaaggtatatcttttgaaaaaaaccaggaacgtctcaat
aaaacttataaagttttaattgataaaaaagacggagactatttcgttggtcgtacagag
tatgattcaccggaagtagataatgaagttttgatagatgctcgtgaacattatgttact
gttggcgatttctgcaaagttaaaattgatcgcgcagaagacttcgatctctacggaact
cctgtaaaataa
DBGET
integrated database retrieval system
