Solitalea canadensis: Solca_3147
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Entry
Solca_3147 CDS
T02084
Name
(GenBank) AMP-forming long-chain acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
scn
Solitalea canadensis
Pathway
scn00061
Fatty acid biosynthesis
scn00071
Fatty acid degradation
scn01100
Metabolic pathways
scn01212
Fatty acid metabolism
scn02024
Quorum sensing
scn04146
Peroxisome
Module
scn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
scn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Solca_3147
00071 Fatty acid degradation
Solca_3147
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Solca_3147
09145 Cellular community - prokaryotes
02024 Quorum sensing
Solca_3147
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
scn01004
]
Solca_3147
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scn04147
]
Solca_3147
Enzymes [BR:
scn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Solca_3147
Lipid biosynthesis proteins [BR:
scn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Solca_3147
Exosome [BR:
scn04147
]
Exosomal proteins
Exosomal proteins of breast milk
Solca_3147
Exosomal proteins of breast cancer cells
Solca_3147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AFD08160
UniProt:
H8KNM7
LinkDB
All DBs
Position
complement(3705972..3707738)
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AA seq
588 aa
AA seq
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MDINTIIDLFDSIKQRFINKPVVSAKENGKWRGYSADEFTDNVNRLSSGLINLGIQKDDK
IANMAFNRPEWNFVDYSIIQTNAIHIPLYPTLADHDIKFILNDAEVKVIFVSGKELYDKI
NSLRSELPLLKEIYVYDDVPGAKSWKELLVGQDEINWDEINKRKSTVSESDILTIIYTSG
TTGTPKGVMLTHKNIVSNLKALREYIPQEVERALSFLPLSHVFERVANYLCLDIGISIYY
AESIDAISSNLAEVKPHFFTTVPRLLEKIYDKITIKGSELTGIKKALFYWALNLGLRYEL
NGANGWWYEMQLKLANKLIFSKWREALGGNVKLIVSGGAALQPRLAKVFMSAQITTLEGY
GLTETSPVIAANHFDTRRYKFNTVGRPIGGVDVRIAEDGELLCKGPNIFAGYYKRPDLTE
KLIDSDGWFHTEDIAEMDSDGFLRITDRKKEMFKTAGGKYVAPQAIENKFKESLLIEQVL
VIGENQRFPAALIVPNFDNLREWCSRHSIPYTTNAEMIRNDQVIAKFTSEAERYNDGFGK
WEQVKKFELLPKEWTIEGGEMTPKLSLKRKVIVNNNLSLIEKIYAQVQ
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggatataaacactataattgatttatttgactcaattaagcagcgatttataaataaa
cccgtagtttctgcaaaggaaaacggtaagtggcgagggtattcagctgatgaatttaca
gataatgttaaccgattaagttctggactaatcaatctggggattcaaaaggatgataaa
attgccaatatggcctttaatcgaccagaatggaactttgttgattattcgattatacaa
acaaacgccattcatattccgctttatcccacattagctgatcatgatataaagttcatc
ttaaatgatgccgaagtaaaagtgatttttgtttcaggaaaagagctttatgataagatc
aatagcttacgttcggaattaccattattaaaagaaatctacgtttatgacgacgttccg
ggtgcaaaatcatggaaagagcttcttgttggtcaggatgaaataaactgggatgagatt
aataaacgcaaatcaacggttagtgaatcagatatattaaccatcatctatacatctgga
actacgggaacacctaagggtgtaatgcttacacataaaaatatcgtcagcaatttaaag
gctttgcgagaatacattccacaggaagttgaacgcgctttaagctttttaccgctttcg
catgtatttgaacgcgtagccaattacctatgcctggatataggaatcagtatctattat
gccgaaagtattgatgcaatttcttctaacctggctgaagtaaaaccacatttctttact
acggttccccgcttacttgaaaaaatctatgataaaataacgatcaaaggttcagagtta
accgggattaagaaagcgttattttattgggcgttaaatctcggactcagatatgaactg
aatggagctaacggctggtggtatgagatgcagttgaaattggcaaataagctgattttt
agcaaatggcgtgaagctttaggtggaaatgtaaaattaatcgtatccggaggagctgcc
ctacaaccacgtttggcaaaagtatttatgtcggctcagataactactcttgagggttat
ggattaacagaaacttcaccggttattgcagcaaatcactttgataccagacgctataaa
tttaacaccgttggccgacctattggtggtgttgatgtaagaatagcagaagacggagaa
ttactttgtaaaggaccgaatatctttgccggatattataaacgtcctgatcttaccgaa
aagttgatcgactccgacggctggtttcatacggaagatatcgcagaaatggatagcgat
ggttttttacgcattaccgatcgtaagaaagaaatgtttaagacagcaggaggtaaatat
gttgcgcctcaggcaattgagaataaatttaaagaatcattattgatcgaacaggttttg
gttattggagaaaatcaacgtttcccggcagccttaatcgttcccaattttgataattta
agagaatggtgctcgcgtcacagcattccgtataccaccaatgcagaaatgattcgtaat
gatcaggtgatagctaagtttacgagtgaagccgaaagatataatgatggctttggaaaa
tgggagcaagtcaaaaagtttgaattacttcctaaagagtggacgattgagggaggagaa
atgacccctaaattaagtttgaagcgaaaagttattgttaataataacttatccctgatc
gaaaaaatatacgcccaggttcaataa
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