Solitalea canadensis: Solca_3310
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Entry
Solca_3310 CDS
T02084
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
scn
Solitalea canadensis
Pathway
scn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Solca_3310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scn03400
]
Solca_3310
DNA repair and recombination proteins [BR:
scn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Solca_3310
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Solca_3310
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AFD08317
UniProt:
H8KWY8
LinkDB
All DBs
Position
complement(3898237..3898968)
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AA seq
243 aa
AA seq
DB search
MGSLHKTKGVVLKVTNYAESSIVVQIFTEHFGLQSFIVNGVRKSKAKHPMSLFQPLNLVE
LIAYHKPTTGLQRISEIRNLPCYTSIPYDTVKSTILLFLNEVVYKSCKQETEEPQLFSFL
YSALQFLDLHQGSVANFHLTFLIHFSKFLGFYPDNFIYNSQEYFDLRDGVFTPLRPTHSQ
TVVQPYSGYIAKLMSLNFESMEQLKISSAERKVLLHALIDYYELHIDSFGKVKSYEVLEE
VLG
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgggttctttacacaaaacaaagggtgtagttttaaaagttaccaattatgctgaaagt
agcattgtggttcagatattcactgagcattttggcctgcaatcgtttatagtaaatggc
gtgcgcaagagcaaagcaaaacaccctatgagtttgtttcagccattgaacttagttgag
ttgatagcttatcataagccgactaccggcctgcaacgtatttcagaaattagaaatctt
ccttgttatacatcaattccttatgatacagttaaaagcacaattctgctgtttttaaat
gaagtagtgtataagtcgtgtaaacaagaaacggaagaacctcagctattttcttttctg
tatagtgccttgcagtttttagacctacatcaggggagtgtcgctaattttcaccttaca
tttctgattcatttctctaaatttcttggtttttatccagataacttcatttacaattct
caggagtattttgatttgcgtgatggtgtttttacccccctaagacccacacattcccaa
actgtagtgcagccttatagcggttatattgccaagttgatgagtttgaattttgagtcg
atggaacaacttaaaatttcatcagctgagagaaaagtgctgcttcacgcactgatcgat
tactatgaacttcatattgatagttttggaaaggtgaaatcttatgaagtgttagaggaa
gtgctaggttga
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