Solitalea canadensis: Solca_4072
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Entry
Solca_4072 CDS
T02084
Name
(GenBank) tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
scn
Solitalea canadensis
Brite
KEGG Orthology (KO) [BR:
scn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scn03016
]
Solca_4072
Enzymes [BR:
scn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Solca_4072
Transfer RNA biogenesis [BR:
scn03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Solca_4072
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AFD09062
UniProt:
H8KMY3
LinkDB
All DBs
Position
complement(4737955..4739373)
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AA seq
472 aa
AA seq
DB search
MFNPGITVKEHDETRQGEALVLDSKSGKNNGRKLYIESYGCQMNFSDSEIVASIMMDMGF
TTTGTYQEADVIFINTCSIRENAEQRVRNRLKDFAVAKLRKPDMMVGVLGCMAERLKAKF
LEEEKLVDIVVGPDAYRDLPNLINSADEGNKAVNVLLSREETYADINPVRLTSNGISAFV
SIMRGCDNMCSFCVVPFTRGRERSRDAHSIVQEVTELYNNGYKEVTLLGQNVDSYKWSSE
DGTEKVNFAQLLERVALVSPDVRIRFSTSHPKDITDEVLYTMDKYDNICKYIHLPVQSGN
SRILDLMNRTYDREWYMERVNAIRRILPDCAISTDIIAGFCSETEEEHQDTLSIMDFAIY
DYAYMFMYSERPGTPAAKKLTDDIPENIKNRRLNEIISKQRDHSKVRLDQQVGKVQKVLI
EGFSKKSDKDYCGRNDQNAMVIFPVSDNIKPGDYVNVFVDRCTTATLIGTVV
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatcctgggattacagttaaagagcatgatgaaacacgccaaggtgaggcgtta
gtattggatagtaaatccggaaaaaataacggccgaaaactttatatagaaagctatggt
tgccagatgaatttttctgattcagaaatcgtagcgtccataatgatggatatgggtttt
actaccaccggcacttaccaggaggctgatgttatctttattaatacctgctctatccgc
gaaaatgcggaacagcgtgtacgtaaccgcctgaaagattttgcagtagcaaaacttcgt
aaaccggatatgatggttggtgttttgggctgtatggcagaacgtttaaaagccaaattt
ttagaagaagaaaaattggtagatattgttgttggccctgatgcttaccgagatcttcca
aatcttattaacagtgctgatgaaggaaacaaggctgttaacgtactcctttctcgtgaa
gaaacttacgcagatattaatccggtgcgtttaacaagcaacggaatttccgcatttgtt
tcaatcatgcgtggatgtgataatatgtgttcattctgtgtggtgccctttacccgtgga
cgagaacgaagcagggacgctcattcaattgtgcaggaggtaactgagctttataataat
ggttataaagaggtaacacttttggggcagaatgtcgattcttataagtggagcagtgag
gatggaactgaaaaagttaattttgctcagctgctggaacgtgtcgctttggttagtccc
gacgtacgtatcagattctcaacttcgcacccgaaagatattaccgatgaagtgctttat
accatggataaatacgataatatctgcaaatacattcatttaccggtacaatcgggtaac
agccgaatccttgatttgatgaaccgtacatacgaccgtgagtggtacatggagcgcgta
aatgccattcgccgtattttgcctgattgcgcaatttcaacagatattattgccggtttc
tgttcagaaactgaagaagaacatcaggatacgttaagcattatggattttgctatctat
gactatgcttacatgtttatgtattcagagcgtccgggaactcctgcagctaaaaaacta
acggatgatatccccgaaaatattaaaaatcgtcgcttaaatgagattattagcaagcaa
cgggatcattcaaaggttcgtcttgaccaacaggtgggtaaagttcagaaagttctaata
gaaggtttttctaaaaaatctgataaagattattgtggacgtaatgaccagaatgcaatg
gttatcttcccagtttctgacaacattaagcctggcgattatgtaaacgtttttgttgat
cgttgtacaacggcgactttaatcggtacagtagtttag
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