Solitalea canadensis: Solca_4100
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Entry
Solca_4100 CDS
T02084
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
scn
Solitalea canadensis
Pathway
scn03030
DNA replication
scn03410
Base excision repair
scn03420
Nucleotide excision repair
scn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Solca_4100
03410 Base excision repair
Solca_4100
03420 Nucleotide excision repair
Solca_4100
03440 Homologous recombination
Solca_4100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scn03032
]
Solca_4100
03400 DNA repair and recombination proteins [BR:
scn03400
]
Solca_4100
Enzymes [BR:
scn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Solca_4100
DNA replication proteins [BR:
scn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Solca_4100
DNA repair and recombination proteins [BR:
scn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Solca_4100
NER (nucleotide excision repair)
GGR (global genome repair) factors
Solca_4100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_2
DUF3913
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
AFD09090
UniProt:
H8KN11
LinkDB
All DBs
Position
complement(4768554..4771382)
Genome browser
AA seq
942 aa
AA seq
DB search
MTKKLFLLDGMALIYRAHFALSKNPRFTSSGLNTSAMMGFTNTLLEVIKKEQPTHIAVVF
DTDAPTERHTDFEHYKAHREAMPEDLSAALPYVKRIIEGFNIPVITFDGYEADDIIGTLA
KKAEQHGFITYMMTPDKDFAQLVTDKIFIYKPARMGNEMEIMGVKEVLQKWEVERVDQVI
DILGLWGDAVDNIPGVPGIGEKTAKTLIQKYGSMENIFANTHELKGKQKENLETFKEQGL
LSKKLATILVNVPIELDDDALKLKEPSKELLEPLFAELEFRTIGKRVFGEQFVVTGGQAM
QNRNMQTDLFGNPVGGPAITVAVQIEEAEEEAYETPTSFKTIANTEHNYQVLNTAEERQQ
LLSQLLMQKSVCFDTETTGTDANNAELVGFSFSWKTGEGFYVPVPEDQIEAQKIVNEFRS
FFENAAIEKIGQNIKYDILILKWYGIEVQGVLFDTMLAHYLIDADTRHNMDFLAESYLNY
SPISITELIGKKGKGQDNMRNVDVDKAGEYASEDADITLQLKHAFEPILPTLNADKLARE
VENPLIYVLADMEKEGIKIDEKGLADYSKELQNDITRLERQIYEKAGVRFNIASPKQLGE
VLFEKLQLDPKAKKTKTGQYQTGEDVLTALAPKHEMVQDVLDFRQLQKLKSTYVDALPLM
INPKTGRVHTSFNQAVAATGRLSSVNPNLQNIPIRTEKGREVRRAFIPKNDDFILLSADY
SQIELRIIAEISKDEGMLDAFLKGYDIHRATAAKVYGVTLDEVTSDQRRNAKAVNFGIIY
GQSAFGLSQNLGIPRKEAAEIIDEYFRQYSGIKQYMSDTMNFARENGYVQTILGRRRYLR
DITSANAVVRGFAERNAINAPIQGSAADMIKVAMINIHRELKSMKVETQMILQVHDELVF
DVPKTEVERVRPVIEELMKSAIKMEVPILVESGLGQNWLEAH
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
ttgactaaaaaattattcctgttagatggtatggcgctgatttatcgcgcccattttgca
ttaagcaaaaatcctcgtttcacttcatccggcctcaacacttcggcaatgatgggtttt
acgaataccttgttagaggtgattaaaaaagaacaacctacacatattgctgtagtattt
gatactgatgctccaacagaacgtcatactgactttgaacattataaagcgcatcgcgaa
gcaatgcccgaggatctttcagctgcattgccatatgtaaagcgaattattgaaggcttc
aatattccggttatcacttttgatggttatgaggcagatgatattataggaactttagca
aaaaaagctgaacaacacggattcattacctatatgatgacgcctgacaaggattttgca
cagctcgtaactgataaaattttcatttataaacctgcacgtatgggtaacgaaatggaa
attatgggggttaaggaagtattgcaaaaatgggaggtagagcgtgttgaccaagtaatt
gatatattaggtttatggggcgatgcagttgacaatatacctggcgttcctggaattggt
gaaaaaacggcaaaaacattgatccagaaatacggctcaatggaaaacatcttcgccaat
acacacgaattaaaaggaaaacaaaaagaaaatctggaaacatttaaagaacaaggatta
ctttctaaaaagttagctaccattcttgttaatgttccgattgaacttgatgatgatgcc
ctaaaacttaaggagccaagcaaggaattgttagagcctctttttgctgaacttgaattc
agaactataggaaaacgtgttttcggtgagcaatttgttgtaactggcggtcaggcaatg
caaaatcgcaacatgcaaacagatctgtttggaaatccggttggcgggccggcaattacg
gtagctgtgcagattgaagaagcggaagaggaagcctacgaaacgccaaccagttttaaa
acgattgccaatactgaacacaattaccaagttcttaacaccgccgaggaaagacagcaa
cttctttcgcagttattaatgcaaaagtctgtttgttttgatactgaaaccaccggaact
gatgctaataatgcagaacttgttggtttttctttctcgtggaaaactggtgaaggtttt
tatgttcccgttccagaagatcaaatcgaagcgcaaaagattgttaacgaatttagaagt
ttctttgagaatgcagcgattgaaaagattggtcaaaatataaaatatgacattttgatc
ctgaaatggtacggaattgaagtgcagggggtattatttgacaccatgctcgctcattac
ctgatcgatgctgacactcgtcataacatggattttctggctgaatcttacctgaattac
tccccgatttccattactgaactgattggcaaaaaaggcaaaggtcaggataacatgcgc
aatgtggatgttgataaagccggtgaatatgcgtctgaagatgccgatattacccttcaa
cttaaacatgcctttgaacctattcttccaacactaaatgctgataaattagctcgcgaa
gtagaaaatccacttatctatgttttagccgacatggaaaaagagggcattaaaattgac
gaaaaaggccttgcagattattctaaggaattacaaaatgatatcacccgtttagaacgt
cagatctacgaaaaagcaggcgtacgttttaatattgcttctccaaaacaattaggagaa
gtattattcgagaaacttcaactcgaccctaaagctaaaaagaccaaaaccggccaatat
caaactggcgaagatgtgttgacggctttggcacccaagcacgaaatggttcaggatgtt
ttggatttccgacaattgcagaaactgaaatctacttatgtagatgcacttccgttgatg
atcaatcctaaaacgggacgagtacacacctcgtttaaccaggctgtagcagcaacagga
agattgagttcagtaaatccgaatttgcaaaatattccgatcagaaccgaaaagggtaga
gaagtaagaagagccttcattcctaaaaatgatgatttcattcttctttctgccgattat
tcgcagatcgaacttcgtattatcgccgaaatcagtaaagacgaaggtatgttagatgct
ttcctgaaaggatacgatattcaccgggctactgcggcaaaggtttatggcgtcacattg
gatgaagttacttctgatcaacgcagaaatgcaaaagcggtgaactttggtatcatttac
ggtcaatcagctttcggtttgtctcaaaaccttggcattccccgtaaagaggccgctgag
attattgacgagtatttccgccaatattcaggtattaaacaatacatgagtgatacgatg
aactttgctcgcgaaaacggttacgttcaaactattttaggtagaagaagatacctgcgc
gacattacctctgctaacgcggtggttcgtggattcgccgaacgaaatgcgattaacgcc
ccaattcaaggctctgcagccgatatgatcaaagtcgccatgattaatattcatcgcgaa
ctaaaatccatgaaagtagaaacccagatgatattgcaggtgcatgatgagctggttttt
gatgttcctaaaacagaagtagaacgagttcgccctgttattgaagaattgatgaagtca
gctataaaaatggaagttccaatccttgtagaaagtggtttaggccaaaactggttagaa
gcgcattaa
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