Solitalea canadensis: Solca_4126
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Entry
Solca_4126 CDS
T02084
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
scn
Solitalea canadensis
Pathway
scn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Solca_4126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scn03019
]
Solca_4126
03110 Chaperones and folding catalysts [BR:
scn03110
]
Solca_4126
03029 Mitochondrial biogenesis [BR:
scn03029
]
Solca_4126
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scn04147
]
Solca_4126
Enzymes [BR:
scn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Solca_4126
Messenger RNA biogenesis [BR:
scn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Solca_4126
Chaperones and folding catalysts [BR:
scn03110
]
Heat shock proteins
HSP60 / Chaperonin
Solca_4126
Mitochondrial biogenesis [BR:
scn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Solca_4126
Exosome [BR:
scn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Solca_4126
Exosomal proteins of other body fluids (saliva and urine)
Solca_4126
Exosomal proteins of breast cancer cells
Solca_4126
Exosomal proteins of colorectal cancer cells
Solca_4126
Exosomal proteins of bladder cancer cells
Solca_4126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AFD09116
UniProt:
H8KN37
LinkDB
All DBs
Position
complement(4797997..4799637)
Genome browser
AA seq
546 aa
AA seq
DB search
MAKLVKYNVEARDALKRGVDTLANAVKVTLGPKGRNVIIDKKFGAPSITKDGVSVAKEIE
LKDALENMGAQMVKEVASKTADIAGDGTTTATVLAQAIVTAGVKNVAAGANPMDLKRGID
KAVAAVIINLKEQSKAVGDDNNKIKQVATISANNDEVIGSLIAEAMEKVKKEGVITVEEA
KGTDTTVEVVEGMQFDRGYLSPYFVTNADKMEAELENPYILIYDKKISSMKELLPILEKQ
VQTGRPLLIIAEDLEGEALATLVVNKIQGRLKVAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGYKLENADLTYLGQAEKVVIDKDNTTVINGAGKKEDIVARVNQIKAQIESTTSDY
DKEKLQERLAKLAGGVAVLYVGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVAFI
RAIAALENLKGHNDDETTGIAIIKRAIEEPLRQICENAGIEGSIVVQKVKEGADDFGYNA
RENRYENLIIAGVIDPTKVSRVALENAASIASMLLTTECVLADEPEEDKGHAHGGAPGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaattagttaaatacaatgttgaagcacgtgacgctttaaagcgcggtgttgat
actttagcaaacgctgttaaagttaccttaggtcctaaaggccgtaacgtaattattgat
aaaaaatttggcgctccttcaatcactaaagacggtgtttcagttgcaaaagaaatcgaa
ctgaaagatgctttagaaaacatgggtgctcagatggttaaagaagtagcttctaaaact
gcagacatcgcaggtgatggtactactactgcaactgtattagctcaggcaattgttact
gctggtgttaaaaacgttgctgccggtgcaaatcctatggatttaaaacgtggtatcgac
aaagcagttgctgctgttattattaacttaaaagagcagtctaaagcagttggtgatgat
aacaacaaaatcaagcaagttgctaccatttcagctaataatgacgaggttatcggttca
ttgatcgctgaagcaatggaaaaagttaaaaaagaaggcgttatcactgttgaagaagct
aaaggaactgatacaactgtagaggttgtagaaggtatgcaatttgatcgtggttatctt
tctccttacttcgtaaccaatgctgacaaaatggaagctgagttggaaaacccttacatt
ttgatctacgacaagaagatctcttcaatgaaagagttgttgccaattttggaaaaacaa
gttcaaacaggccgtcctttattgatcatcgctgaagatcttgaaggtgaagctttagct
actttggtggtaaataaaatccaaggtcgtttaaaagttgccgctgttaaagctccaggt
tttggcgatcgtcgtaaagctatgttggaagacatcgctatcttaactggtggtactgtt
atttctgaagagcgtggttacaagttagaaaacgctgatttaacttacttaggtcaggct
gagaaagtagttatcgataaagataatactactgttatcaacggagctggtaagaaagaa
gatatcgttgctcgcgttaaccaaatcaaagctcagattgagtctactacttctgattac
gacaaagaaaaactacaagagcgtttggctaaattagctggcggtgttgcagttctttac
gttggtgcagctaccgaagtagaaatgaaagagaaaaaagaccgtgttgatgatgcatta
catgcaactcgtgctgctgtagaagaaggtatcgttgctggtggtggtgttgcatttatc
cgtgcgatcgctgcattagaaaacttaaaaggccataatgacgacgagactactggtatc
gctatcattaagcgcgctattgaagagcctttacgtcaaatctgtgaaaacgcaggtatt
gaaggttctatcgtagttcaaaaagttaaagaaggtgctgatgacttcggatacaacgct
cgtgaaaaccgttacgaaaaccttatcattgccggtgtaatcgatcctactaaagtatca
cgtgttgctttagaaaacgcagcttcaattgcatctatgttgttaacaactgagtgtgta
ttagctgatgagcctgaagaagataaaggtcatgctcatggtggtgctccaggtatgggc
ggcatgggtggtatgatgtaa
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