Streptomyces coelicolor: SCO0601
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Entry
SCO0601 CDS
T00085
Symbol
SCF55.25c
Name
(GenBank) putative secreted protein
KO
K10979
DNA end-binding protein Ku
Organism
sco
Streptomyces coelicolor
Pathway
sco03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SCO0601 (SCF55.25c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sco03400
]
SCO0601 (SCF55.25c)
DNA repair and recombination proteins [BR:
sco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
SCO0601 (SCF55.25c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Rho_N
Motif
Other DBs
NCBI-ProteinID:
CAB61295
Kitasato:
SCO0601
UniProt:
Q9RJP3
LinkDB
All DBs
Position
complement(640719..641762)
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AA seq
347 aa
AA seq
DB search
MARAIWTGVITFGLVSVPVGLFTATEDHTVHFHQLQRGTSDRIRNRRVNERTGKEVDADD
IVKGYEVSEGEYVVVQPEELDEIAPGRSRTLEITDFVDLDRIEPVYFGRTYYLAPRGKEY
LKVYELLRTALADTGKAGVATFVMRNRQYLTALRAEDRVLLLQTLHWADEVRDPVEELPE
LPSDRVGRGKELDMALRLVDALSGDWEPARYRDTYQDKVRELVRAKAEGEEVAVAEEAPG
ATNVVDLMEVLRGSLEQAKGAGTGGKRSAASRKKATEPSRRTPAERGGLRELSKAELYRR
ATEQGIAGRSKMSRQELVDALTDRDHGRGRGTGSGSRGRRKKTTTAA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgggcgatctggacgggtgtgatcaccttcgggctggtctcggtacccgtcggt
ctgttcacggcgaccgaggaccacacggtgcacttccaccagttgcagcggggcacctcg
gaccggatccgcaaccggcgggtgaacgagcgcaccggcaaggaggtcgacgccgacgac
atcgtcaagggctacgaggtgagcgagggcgaatacgtcgtcgtgcagcccgaggaactc
gacgagatcgcgccgggacgctcccgcaccctcgagatcaccgacttcgtggacctggac
cggatcgagccggtctacttcggccgcacctactacctcgcgccgcgcggcaaggagtac
ctcaaggtctacgagctgctgcgcaccgcgctcgccgacaccggcaaggccggggtcgcc
accttcgtcatgcgcaaccggcagtacctgaccgcgctgcgcgccgaggacagggtcctg
ctgctccagacgctgcactgggccgacgaggtccgcgaccccgtcgaggagcttccggaa
ctgccgtccgaccgggtgggccgcggcaaggagctggacatggcgctgcgtctcgtcgac
gccctcagcggcgactgggaacccgcccgctaccgcgacacctaccaggacaaggtccgc
gagctggtccgggccaaggccgagggcgaggaggtcgccgtcgccgaggaggcgcccggg
gccaccaacgtcgtcgacctgatggaggtcctgcgcggcagcctggagcaggcgaagggc
gcgggcacgggcggcaagcggtccgctgcgtcgcggaagaaggccaccgagccctcccgc
cggaccccggccgagcggggcgggctgcgggagctgagcaaggccgagctgtaccggcgg
gccaccgaacagggcatcgccggccgttcgaagatgagccgccaggaactcgtcgacgcg
ctcaccgaccgcgaccacggccgcggcagggggaccggcagcggcagccgcggccgccgg
aagaagacgacgaccgcggcctga
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