Streptomyces coelicolor: SCO0842
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Entry
SCO0842 CDS
T00085
Symbol
SCF43A.32
Name
(GenBank) putative deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sco
Streptomyces coelicolor
Brite
KEGG Orthology (KO) [BR:
sco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sco03400
]
SCO0842 (SCF43A.32)
Enzymes [BR:
sco01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SCO0842 (SCF43A.32)
DNA repair and recombination proteins [BR:
sco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SCO0842 (SCF43A.32)
Prokaryotic type
SCO0842 (SCF43A.32)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Tc-38
Motif
Other DBs
NCBI-ProteinID:
CAB48919
Kitasato:
SCO0842
UniProt:
Q9XA83
LinkDB
All DBs
Position
890835..892211
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AA seq
458 aa
AA seq
DB search
MATSVVLFTRDLRLHDHPPLRAALDRSDAVVPLFVRDRAVDAAGFAAPNRLALLADCLRD
LDSGLRDRGGRLVVRSGDLVEEVCAVAGEAEADEVHLAADVSAHAHRREELLRSALSARG
CRLHVHDAVTTVLAPGSVTPASSDHFAVFTPYFRRWSERAVREPLAAPRRVRVPDGVGSE
PLPARGDLTGLSPGLPTGGERDARKRLTAWLRGGIADYADHHDDLAGDATSRLSPDLHLG
ALSPVELVHRARRAGGPGAEAFVRQLAWRDFHHQVLAARPHASAADYRTRHDRWRTGAAA
EADAAAWRDGRTGYPVVDAAMRQLRHEGWMHNRGRLLVASFLTKTLYVDWRVGAWHFLEL
LVDGDVANNQLNWQWAAGTGTDTRPHRVLNPTTQARRFDPGGTYVRRWVPELAGLAGRSV
HEPWRLARAARAAYDAYPDPIVDLSEGLDRFRRARGRD
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggccacgtcggtcgtcctgttcacccgcgatctgcggctgcacgaccatccgccgctg
cgtgcggccctggaccgctccgatgccgtggtgccgctgttcgtccgcgaccgggccgtg
gacgcggccggattcgccgcgcccaaccggctcgccctcctcgccgactgtctgcgggac
ctggactcggggctgcgggaccggggcgggcggctggtcgtccgctccggcgacctggtc
gaggaggtgtgcgcggtggccggggaggcggaggccgacgaggtgcacctggcggccgac
gtcagcgcgcacgcgcaccggcgcgaggagctcctgcggtccgccctgtcggcgcggggc
tgccggctgcacgtgcacgacgccgtgaccaccgtgctggccccgggatccgtcaccccg
gcctcctccgaccacttcgcggtcttcacgccgtacttccggcgctggagcgagcgagcc
gtccgcgagccgctggccgccccgcgcagggtccgggtcccggacggcgtcggctcggag
ccgctgcccgcccgcggggacctgacggggctgtccccggggctgccgaccggtggggaa
cgggacgccaggaagcgcctgacggcgtggttgcgcggcggcatcgccgactacgcggac
caccacgacgacctggccggcgacgccacctcccggctctcccccgacctgcacctgggt
gccctctcccccgtcgagctggtccaccgggcccggcgtgcgggcggccccggagccgag
gcgttcgtgcggcagctggcctggcgggacttccaccaccaggtgctggccgcccgcccg
cacgcgtcggccgccgactaccgcacccggcacgaccgctggcgcaccggcgcggccgcc
gaggcggacgccgccgcgtggcgggacgggcgcacgggctacccggtcgtggacgccgcg
atgcgccagctgcggcacgaggggtggatgcacaaccggggccggctgctggtcgccagt
ttcctcaccaagacgctgtacgtggactggcgggtcggcgcctggcacttcctggagctg
ctcgtggacggcgacgtggccaacaaccagctgaactggcagtgggccgcgggcaccggt
accgacacccggccgcaccgggtcctcaacccgaccacgcaggcgcggcggttcgacccc
ggcgggacgtacgtccggcgctgggtgcccgagctggccgggctcgcgggccgctccgtg
cacgagccctggcggctggcgagggcggcgcgtgccgcgtacgacgcctaccccgacccg
atcgtcgacctctccgagggcctggaccgtttcaggcgggcccgcggacgcgactga
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