Streptomyces coelicolor: SCO1301
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Entry
SCO1301 CDS
T00085
Symbol
SCBAC36F5.12c
Name
(GenBank) putative exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sco
Streptomyces coelicolor
Brite
KEGG Orthology (KO) [BR:
sco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sco03400
]
SCO1301 (SCBAC36F5.12c)
DNA repair and recombination proteins [BR:
sco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SCO1301 (SCBAC36F5.12c)
Archaeal homologous recombinant proteins
SCO1301 (SCBAC36F5.12c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
CAC42848
Kitasato:
SCO1301
UniProt:
Q93IW9
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All DBs
Position
complement(1377579..1378742)
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AA seq
387 aa
AA seq
DB search
MRLLHTSDWHLGRAFHRVNMLGAQAGFVGHLVETVREHSVDAVVVSGDVYDRAVPPLAAV
ELFDDALHRLAGLGVPTVMISGNHDSARRLGVGAGLIDRAGIHLRTDPAGCGTPVVLGDA
HGDVAFYGLPYLEPALVKTEFGVEKAGHEAVLAAAMDRVRADLATRAAGTRSVVLAHAFV
TGGEQSDSERDITVGGVAAVPAGVFDGVDYVALGHLHGCQTLTERVRYSGSPLPYSFSEH
RHRKSMWLVDLGADGSVTAERIDCPVPRALARLRGTLADLLADPELTPHEDAWVEATLTD
PVRPDEPMARLTERFPHTLSLVFDPERAPDEPGVSYARRLADRSDQQIAEDFVTHVRGAG
PDDDEQAVLRDAFDAVRADETVREVAR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgagattgctgcacacgtccgactggcacctcggccgggcgttccaccgggtgaacatg
ctcggcgcccaggcagggttcgtcggccacctcgtcgagaccgtgcgcgagcactccgtc
gacgccgtggtcgtgtcgggagacgtgtacgaccgcgcggtgccgccgctcgccgccgtc
gagctgttcgacgacgccctgcaccgcctcgccgggctcggcgtgccgaccgtgatgatc
tccggcaaccacgactcggcccgacgcctcggggtcggcgccgggctcatcgaccgcgcc
ggcatccacctgcgcaccgacccggcgggctgcggcaccccggtggtgctgggcgacgcc
cacggggacgtggccttctacgggctgccgtatctcgaaccggcgctggtcaagaccgag
ttcggcgtggagaaggcggggcacgaggccgtgctcgccgccgccatggaccgggtgcgc
gccgacctcgccacgcgcgcggcgggcacccggtccgtcgtcctcgcgcacgccttcgtc
accggcggtgagcagagcgacagcgagcgggacatcaccgtcggcggggtcgccgccgtg
cccgccggtgtcttcgacggcgtggactacgtcgcgctggggcatctgcacggctgccag
accctcaccgagcgcgtccgctactccggctccccactgccgtactccttctcggagcac
cggcaccgcaagagcatgtggctcgtcgatctgggcgccgacgggtcggtcacggccgag
cggatcgactgcccggtgccgcgcgcgctggcccggctgcgcggcacgctggcggacctg
ctcgccgacccggagctgaccccgcacgaggacgcgtgggtcgaggcgaccctcaccgac
ccggtccgccccgacgagcccatggcccggctcaccgagcgcttcccgcacacgctcagc
ctcgtcttcgaccccgagcgcgcccccgacgagcccggagtgtcctacgcccggcgcctc
gccgaccgcagcgaccagcagatcgcggaggacttcgtgacccacgtgcgcggcgccggg
cccgacgacgacgagcaggccgtgctccgggacgccttcgacgcggtacgcgcggacgag
accgtgcgggaggtggcccggtga
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